Project name: 1pga

Status: done

Started: 2026-03-28 07:05:46
Settings
Chain sequence(s) A: MTYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-3.5327
Maximal score value
1.1084
Average score
-1.2837
Total score value
-71.8898

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.6154
2 T A -0.4229
3 Y A 0.0000
4 K A -1.0796
5 L A 0.0000
6 I A -0.6466
7 L A 0.0000
8 N A -2.4369
9 G A 0.0000
10 K A -2.7425
11 T A -1.5160
12 L A -1.6429
13 K A -2.4613
14 G A -1.8615
15 E A -2.1919
16 T A -0.9954
17 T A -1.0527
18 T A -0.8240
19 E A -1.3024
20 A A 0.0000
21 V A 1.1084
22 D A -0.3982
23 A A -0.9290
24 A A -0.5102
25 T A -0.6669
26 A A 0.0000
27 E A -1.3644
28 K A -1.9152
29 V A -0.8094
30 F A 0.0000
31 K A -2.3656
32 Q A -2.5709
33 Y A -1.5553
34 A A 0.0000
35 N A -3.3670
36 D A -3.4106
37 N A -2.6758
38 G A -2.4776
39 V A 0.0000
40 D A -3.5327
41 G A -3.0408
42 E A -2.5956
43 W A -1.0602
44 T A -0.5917
45 Y A -0.8372
46 D A -2.1226
47 D A -2.4989
48 A A -1.3468
49 T A -1.2497
50 K A -1.6154
51 T A -1.0919
52 F A 0.0000
53 T A -0.5313
54 V A 0.0000
55 T A -2.3587
56 E A -2.9474
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Laboratory of Theory of Biopolymers 2018