| Chain sequence(s) |
A: ASGGGGSASEVQLVESGGGLVQPGGSLRLSCAASLEHVAIGWFRQAPGKEREGVSCISSSGGHIHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVSYWECYDKLDYWGQGTLVTVSSPP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:22)
[INFO] Main: Simulation completed successfully. (00:01:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0201 | |
| 2 | S | A | -0.2875 | |
| 3 | G | A | -0.5903 | |
| 4 | G | A | -0.6367 | |
| 5 | G | A | -0.6367 | |
| 6 | G | A | -0.5903 | |
| 7 | S | A | -0.2871 | |
| 8 | A | A | -0.0197 | |
| 9 | S | A | -0.5344 | |
| 10 | E | A | -1.8055 | |
| 11 | V | A | -0.2018 | |
| 12 | Q | A | -0.8888 | |
| 13 | L | A | 0.0000 | |
| 14 | V | A | 1.7361 | |
| 15 | E | A | 0.0951 | |
| 16 | S | A | -0.2402 | |
| 17 | G | A | -0.3444 | |
| 18 | G | A | -0.2651 | |
| 19 | G | A | 0.0670 | |
| 20 | L | A | 1.5115 | |
| 21 | V | A | 0.0000 | |
| 22 | Q | A | -1.2391 | |
| 23 | P | A | -0.5267 | |
| 24 | G | A | -0.5460 | |
| 25 | G | A | -0.1693 | |
| 26 | S | A | -0.1836 | |
| 27 | L | A | -0.1294 | |
| 28 | R | A | -1.8488 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -0.0111 | |
| 31 | C | A | 0.0000 | |
| 32 | A | A | 0.0260 | |
| 33 | A | A | -0.0286 | |
| 34 | S | A | -0.0887 | |
| 35 | L | A | 0.3163 | |
| 36 | E | A | -1.8342 | |
| 37 | H | A | -1.1005 | |
| 38 | V | A | 0.0000 | |
| 39 | A | A | 0.0000 | |
| 40 | I | A | 0.0000 | |
| 41 | G | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | F | A | 0.2028 | |
| 44 | R | A | 0.0000 | |
| 45 | Q | A | -0.5891 | |
| 46 | A | A | -0.1207 | |
| 47 | P | A | -0.3373 | |
| 48 | G | A | -0.8143 | |
| 49 | K | A | -2.1213 | |
| 50 | E | A | -2.3207 | |
| 51 | R | A | -1.5859 | |
| 52 | E | A | -1.2368 | |
| 53 | G | A | -0.2873 | |
| 54 | V | A | 0.0000 | |
| 55 | S | A | 0.0000 | |
| 56 | C | A | 0.0000 | |
| 57 | I | A | 0.0000 | |
| 58 | S | A | 0.0000 | |
| 59 | S | A | 0.0000 | |
| 60 | S | A | -0.2381 | |
| 61 | G | A | -0.2615 | |
| 62 | G | A | -0.6702 | |
| 63 | H | A | -0.8937 | |
| 64 | I | A | 0.6501 | |
| 65 | H | A | -0.6474 | |
| 66 | Y | A | 0.1206 | |
| 67 | A | A | -0.2601 | |
| 68 | D | A | -1.8187 | |
| 69 | S | A | -0.4967 | |
| 70 | V | A | 0.0000 | |
| 71 | K | A | -1.7844 | |
| 72 | G | A | -0.8264 | |
| 73 | R | A | -0.3788 | |
| 74 | F | A | 0.0000 | |
| 75 | T | A | -0.0475 | |
| 76 | I | A | 0.0000 | |
| 77 | S | A | -0.1651 | |
| 78 | R | A | -0.4134 | |
| 79 | D | A | -0.8066 | |
| 80 | N | A | -1.4278 | |
| 81 | S | A | -0.7469 | |
| 82 | K | A | -1.7743 | |
| 83 | N | A | -0.6462 | |
| 84 | T | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | Y | A | 0.1524 | |
| 87 | L | A | 0.0000 | |
| 88 | Q | A | -0.6067 | |
| 89 | M | A | 0.0000 | |
| 90 | N | A | -0.5764 | |
| 91 | S | A | -0.3461 | |
| 92 | L | A | 0.0000 | |
| 93 | R | A | -1.6509 | |
| 94 | A | A | -0.5693 | |
| 95 | E | A | -1.8095 | |
| 96 | D | A | 0.0000 | |
| 97 | T | A | -0.0162 | |
| 98 | A | A | 0.0000 | |
| 99 | V | A | 0.7460 | |
| 100 | Y | A | 0.0000 | |
| 101 | Y | A | 0.1285 | |
| 102 | C | A | 0.0000 | |
| 103 | A | A | 0.0000 | |
| 104 | A | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | V | A | 1.7332 | |
| 107 | S | A | 0.3653 | |
| 108 | Y | A | 0.8555 | |
| 109 | W | A | 1.0722 | |
| 110 | E | A | -1.0503 | |
| 111 | C | A | -0.0558 | |
| 112 | Y | A | 0.2819 | |
| 113 | D | A | -1.6335 | |
| 114 | K | A | -1.9177 | |
| 115 | L | A | -0.4455 | |
| 116 | D | A | -1.6836 | |
| 117 | Y | A | 0.1593 | |
| 118 | W | A | 0.5751 | |
| 119 | G | A | -0.1849 | |
| 120 | Q | A | -1.2272 | |
| 121 | G | A | -0.2938 | |
| 122 | T | A | 0.2570 | |
| 123 | L | A | 1.6186 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | 0.1645 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -0.1631 | |
| 128 | S | A | -0.2819 | |
| 129 | P | A | -0.3396 | |
| 130 | P | A | -0.3011 |