| Chain sequence(s) |
A: FEFEFEGGKGH
C: FEFEFEGGKGH B: FEFEFEGGKGH E: FEFEFEGGKGH D: FEFEFEGGKGH G: FEFEFEGGKGH F: FEFEFEGGKGH H: FEFEFEGGKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:27)
[INFO] Main: Simulation completed successfully. (00:02:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.3931 | |
| 2 | E | A | -1.9847 | |
| 3 | F | A | -2.0726 | |
| 4 | E | A | -3.7807 | |
| 5 | F | A | 0.0000 | |
| 6 | E | A | -4.3256 | |
| 7 | G | A | -3.6752 | |
| 8 | G | A | -3.7050 | |
| 9 | K | A | -3.9568 | |
| 10 | G | A | -3.2150 | |
| 11 | H | A | -2.3257 | |
| 1 | F | B | 0.7554 | |
| 2 | E | B | -1.7473 | |
| 3 | F | B | -1.8647 | |
| 4 | E | B | -3.8203 | |
| 5 | F | B | 0.0000 | |
| 6 | E | B | -4.3007 | |
| 7 | G | B | -3.6850 | |
| 8 | G | B | -3.5612 | |
| 9 | K | B | -4.0874 | |
| 10 | G | B | -3.6162 | |
| 11 | H | B | -2.4036 | |
| 1 | F | C | 1.1761 | |
| 2 | E | C | -1.4894 | |
| 3 | F | C | -1.8229 | |
| 4 | E | C | -3.6820 | |
| 5 | F | C | 0.0000 | |
| 6 | E | C | -4.2542 | |
| 7 | G | C | -3.6758 | |
| 8 | G | C | -3.6218 | |
| 9 | K | C | -4.0058 | |
| 10 | G | C | -3.3465 | |
| 11 | H | C | -2.3587 | |
| 1 | F | D | 1.1398 | |
| 2 | E | D | -1.5470 | |
| 3 | F | D | -2.1758 | |
| 4 | E | D | -3.7754 | |
| 5 | F | D | 0.0000 | |
| 6 | E | D | -4.2748 | |
| 7 | G | D | -3.6352 | |
| 8 | G | D | -3.5959 | |
| 9 | K | D | -3.9605 | |
| 10 | G | D | -3.2388 | |
| 11 | H | D | -2.4206 | |
| 1 | F | E | 0.7086 | |
| 2 | E | E | -1.7765 | |
| 3 | F | E | 0.0000 | |
| 4 | E | E | -3.8785 | |
| 5 | F | E | 0.0000 | |
| 6 | E | E | -4.2375 | |
| 7 | G | E | -3.6279 | |
| 8 | G | E | -3.6456 | |
| 9 | K | E | -3.9981 | |
| 10 | G | E | -3.2586 | |
| 11 | H | E | -2.4156 | |
| 1 | F | F | 1.0702 | |
| 2 | E | F | -1.5346 | |
| 3 | F | F | -2.0165 | |
| 4 | E | F | -3.6937 | |
| 5 | F | F | 0.0000 | |
| 6 | E | F | -4.2525 | |
| 7 | G | F | -3.6705 | |
| 8 | G | F | -3.6657 | |
| 9 | K | F | -3.9820 | |
| 10 | G | F | -3.2384 | |
| 11 | H | F | -2.3768 | |
| 1 | F | G | 1.2463 | |
| 2 | E | G | -1.4409 | |
| 3 | F | G | -2.0707 | |
| 4 | E | G | -3.7837 | |
| 5 | F | G | 0.0000 | |
| 6 | E | G | -4.3481 | |
| 7 | G | G | -3.9041 | |
| 8 | G | G | -3.6055 | |
| 9 | K | G | -3.9359 | |
| 10 | G | G | -3.1094 | |
| 11 | H | G | -2.3080 | |
| 1 | F | H | 1.2550 | |
| 2 | E | H | -1.5852 | |
| 3 | F | H | -1.6474 | |
| 4 | E | H | -3.6098 | |
| 5 | F | H | 0.0000 | |
| 6 | E | H | -4.1377 | |
| 7 | G | H | -3.4168 | |
| 8 | G | H | -3.6918 | |
| 9 | K | H | -3.8924 | |
| 10 | G | H | -3.1653 | |
| 11 | H | H | -2.1971 |