Project name: query_structure

Status: done

Started: 2026-03-16 23:38:27
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDAYVGYGSSVAYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYYEGDDLYSSMSPSSINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-2.8297
Maximal score value
1.8155
Average score
-0.3225
Total score value
-32.5739

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6194
2 S A -0.7159
3 S A -0.0856
4 V A 0.7927
5 S A -0.0999
6 S A 0.1181
7 V A 0.1500
8 P A -0.6566
9 T A -1.2751
10 K A -2.2848
11 L A 0.0000
12 E A -1.7174
13 V A -0.0095
14 V A 1.5521
15 A A 0.9113
16 A A 0.3062
17 T A -0.1902
18 P A -0.8074
19 T A -0.5357
20 S A -0.3008
21 L A 0.0000
22 L A 0.7846
23 I A 0.0000
24 S A -0.6826
25 W A 0.0000
26 D A -1.7880
27 A A -0.3155
28 Y A 0.7905
29 V A 1.8155
30 G A 1.2844
31 Y A 1.3346
32 G A 0.3259
33 S A 0.3551
34 S A 0.3629
35 V A 0.7740
36 A A 0.6391
37 Y A 0.3270
38 Y A 0.0000
39 R A -0.6528
40 I A 0.0000
41 T A 0.0000
42 Y A -0.1618
43 G A 0.0000
44 E A -1.2082
45 T A -1.2281
46 G A -1.2936
47 G A -1.1790
48 N A -1.5965
49 S A -0.7221
50 P A -0.1487
51 V A 0.6638
52 Q A -0.5027
53 E A -1.3109
54 F A -0.4973
55 T A -0.2331
56 V A 0.0010
57 P A -0.2173
58 G A -0.1201
59 S A -0.2774
60 S A -0.3344
61 S A -0.4714
62 T A -0.1772
63 A A 0.0000
64 T A 0.2721
65 I A 0.0000
66 S A -0.4685
67 G A -0.6824
68 L A 0.0000
69 S A -0.8252
70 P A -1.0093
71 G A -1.1492
72 V A -0.9587
73 D A -1.7967
74 Y A 0.0000
75 T A -0.8305
76 I A 0.0000
77 T A -0.4402
78 V A 0.0000
79 Y A 0.1741
80 A A 0.0000
81 Y A 0.7846
82 Y A 0.0000
83 Y A -0.0759
84 E A -1.8953
85 G A -2.1834
86 D A -2.8297
87 D A -2.5027
88 L A -0.1972
89 Y A 0.5369
90 S A 0.9342
91 S A 0.0000
92 M A 1.0790
93 S A 0.3784
94 P A 0.1778
95 S A 0.0000
96 S A -0.5218
97 I A 0.0000
98 N A -1.7860
99 Y A -1.8554
100 R A -2.5176
101 T A -1.2571
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Laboratory of Theory of Biopolymers 2018