| Chain sequence(s) |
A: LPRDTSRCVGYHGYCIRSKVCPKPFAAFGTCSWRQKTCCVDTTSDFHTCQDKGGHCVSPKIRCLEEQLGLCPLKRWTCCKEI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.0259 | |
| 2 | P | A | -0.3462 | |
| 3 | R | A | -1.7369 | |
| 4 | D | A | 0.0000 | |
| 5 | T | A | 0.0000 | |
| 6 | S | A | -0.4286 | |
| 7 | R | A | -1.5406 | |
| 8 | C | A | 0.0000 | |
| 9 | V | A | 1.3685 | |
| 10 | G | A | 0.4915 | |
| 11 | Y | A | 1.0049 | |
| 12 | H | A | 0.4177 | |
| 13 | G | A | 0.0000 | |
| 14 | Y | A | 1.0622 | |
| 15 | C | A | 0.1454 | |
| 16 | I | A | -0.4869 | |
| 17 | R | A | -2.3432 | |
| 18 | S | A | -1.6180 | |
| 19 | K | A | -1.1680 | |
| 20 | V | A | 0.5896 | |
| 21 | C | A | -0.1210 | |
| 22 | P | A | -0.7900 | |
| 23 | K | A | -1.6921 | |
| 24 | P | A | -1.3590 | |
| 25 | F | A | -0.6595 | |
| 26 | A | A | -0.6627 | |
| 27 | A | A | -0.2718 | |
| 28 | F | A | 0.0000 | |
| 29 | G | A | -1.1203 | |
| 30 | T | A | -1.2174 | |
| 31 | C | A | -0.4781 | |
| 32 | S | A | -1.0254 | |
| 33 | W | A | -1.2575 | |
| 34 | R | A | -2.5175 | |
| 35 | Q | A | -2.4959 | |
| 36 | K | A | -2.4045 | |
| 37 | T | A | -1.3376 | |
| 38 | C | A | 0.0000 | |
| 39 | C | A | 0.0000 | |
| 40 | V | A | 0.0000 | |
| 41 | D | A | -1.3552 | |
| 42 | T | A | -1.1727 | |
| 43 | T | A | -1.0948 | |
| 44 | S | A | -1.3451 | |
| 45 | D | A | -2.1361 | |
| 46 | F | A | -1.0544 | |
| 47 | H | A | -1.5323 | |
| 48 | T | A | -1.6070 | |
| 49 | C | A | 0.0000 | |
| 50 | Q | A | -2.7717 | |
| 51 | D | A | -2.5825 | |
| 52 | K | A | -2.2165 | |
| 53 | G | A | -1.9486 | |
| 54 | G | A | -2.2530 | |
| 55 | H | A | -1.3019 | |
| 56 | C | A | -0.1765 | |
| 57 | V | A | 0.0000 | |
| 58 | S | A | -1.1351 | |
| 59 | P | A | -1.5869 | |
| 60 | K | A | -1.8267 | |
| 61 | I | A | -0.8718 | |
| 62 | R | A | -1.4568 | |
| 63 | C | A | -0.4628 | |
| 64 | L | A | 0.3342 | |
| 65 | E | A | -1.6425 | |
| 66 | E | A | -2.2028 | |
| 67 | Q | A | 0.0000 | |
| 68 | L | A | -1.0175 | |
| 69 | G | A | -0.3683 | |
| 70 | L | A | 0.7435 | |
| 71 | C | A | 0.0000 | |
| 72 | P | A | -0.0540 | |
| 73 | L | A | -0.2292 | |
| 74 | K | A | -1.8329 | |
| 75 | R | A | -2.1955 | |
| 76 | W | A | -1.1895 | |
| 77 | T | A | -0.8034 | |
| 78 | C | A | 0.0000 | |
| 79 | C | A | 0.0000 | |
| 80 | K | A | -1.6095 | |
| 81 | E | A | -1.5572 | |
| 82 | I | A | 0.8331 |