Chain sequence(s) |
A: KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | AT9A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.837775 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:39) [INFO] FoldX: Starting FoldX energy minimalization (00:00:45) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21) [INFO] Main: Simulation completed successfully. (00:01:22) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | K | A | -1.1548 | |
2 | V | A | 1.4477 | |
3 | F | A | 0.0000 | |
4 | E | A | -1.8965 | |
5 | R | A | -0.7364 | |
6 | C | A | -0.1095 | |
7 | E | A | -0.6361 | |
8 | L | A | 0.0000 | |
9 | T | A | 0.0000 | mutated: AT9A |
10 | R | A | -1.8441 | |
11 | T | A | 0.0000 | |
12 | L | A | 0.0000 | |
13 | K | A | -1.3058 | |
14 | R | A | -1.9426 | |
15 | L | A | 0.0168 | |
16 | G | A | -0.2844 | |
17 | M | A | 0.0000 | |
18 | D | A | -1.1779 | |
19 | G | A | -0.6619 | |
20 | Y | A | -0.1729 | |
21 | R | A | -1.8864 | |
22 | G | A | -0.8640 | |
23 | I | A | 0.0000 | |
24 | S | A | -0.1470 | |
25 | L | A | 0.0000 | |
26 | A | A | 0.0000 | |
27 | N | A | -0.2403 | |
28 | W | A | 0.0000 | |
29 | M | A | 0.0000 | |
30 | C | A | 0.0000 | |
31 | L | A | 0.0000 | |
32 | A | A | 0.0000 | |
33 | K | A | -0.7022 | |
34 | W | A | 0.2700 | |
35 | E | A | -0.2800 | |
36 | S | A | -0.1563 | |
37 | G | A | -0.4379 | |
38 | Y | A | 0.0000 | |
39 | N | A | -0.1206 | |
40 | T | A | 0.0000 | |
41 | R | A | -1.8424 | |
42 | A | A | -0.3408 | |
43 | T | A | -0.2100 | |
44 | N | A | -0.5498 | |
45 | Y | A | 1.0985 | |
46 | N | A | -0.1440 | |
47 | A | A | -0.1007 | |
48 | G | A | -0.7333 | |
49 | D | A | -1.9157 | |
50 | R | A | -2.1009 | |
51 | S | A | 0.0000 | |
52 | T | A | 0.1334 | |
53 | D | A | -0.2669 | |
54 | Y | A | 0.0000 | |
55 | G | A | 0.0000 | |
56 | I | A | 0.0000 | |
57 | F | A | 0.0000 | |
58 | Q | A | -0.1514 | |
59 | I | A | 0.0000 | |
60 | N | A | -0.2313 | |
61 | S | A | 0.0000 | |
62 | R | A | -0.0035 | |
63 | Y | A | 1.4764 | |
64 | W | A | 0.3644 | |
65 | C | A | 0.0000 | |
66 | N | A | -0.8110 | |
67 | D | A | -0.5716 | |
68 | G | A | -0.8449 | |
69 | K | A | -1.7860 | |
70 | T | A | 0.0000 | |
71 | P | A | -0.2656 | |
72 | G | A | -0.4948 | |
73 | A | A | 0.2346 | |
74 | V | A | 1.8724 | |
75 | N | A | 0.1304 | |
76 | A | A | 0.0032 | |
77 | C | A | -0.0825 | |
78 | H | A | -0.9201 | |
79 | L | A | 0.0590 | |
80 | S | A | -0.1905 | |
81 | C | A | 0.0000 | |
82 | S | A | -0.2115 | |
83 | A | A | -0.0317 | |
84 | L | A | 0.0000 | |
85 | L | A | 0.1246 | |
86 | Q | A | -0.9058 | |
87 | D | A | -2.1382 | |
88 | N | A | -1.6027 | |
89 | I | A | 0.0000 | |
90 | A | A | -0.1045 | |
91 | D | A | -0.7290 | |
92 | A | A | 0.0000 | |
93 | V | A | 0.0000 | |
94 | A | A | 0.0585 | |
95 | C | A | 0.0000 | |
96 | A | A | 0.0000 | |
97 | K | A | -0.4815 | |
98 | R | A | -1.1359 | |
99 | V | A | 0.0000 | |
100 | V | A | 0.0000 | |
101 | R | A | -1.9962 | |
102 | D | A | -1.2643 | |
103 | P | A | -0.5313 | |
104 | Q | A | -0.6977 | |
105 | G | A | -0.1776 | |
106 | I | A | 0.0000 | |
107 | R | A | -1.5729 | |
108 | A | A | -0.2672 | |
109 | W | A | 0.0000 | |
110 | V | A | 1.7745 | |
111 | A | A | 0.3568 | |
112 | W | A | -0.1563 | |
113 | R | A | -1.7825 | |
114 | N | A | -1.7514 | |
115 | R | A | -1.2958 | |
116 | C | A | 0.0000 | |
117 | Q | A | -0.7873 | |
118 | N | A | -1.6888 | |
119 | R | A | -2.4095 | |
120 | D | A | -2.0957 | |
121 | V | A | -0.4862 | |
122 | R | A | -2.0307 | |
123 | Q | A | -1.5054 | |
124 | Y | A | -0.0213 | |
125 | V | A | 0.0375 | |
126 | Q | A | -1.2237 | |
127 | G | A | -0.6859 | |
128 | C | A | 0.0000 | |
129 | G | A | -0.2620 | |
130 | V | A | 1.0171 |