| Chain sequence(s) |
A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYELYKGYTYPYYSSPISINYRTC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3932 | |
| 2 | S | A | -0.0094 | |
| 3 | S | A | 0.4214 | |
| 4 | V | A | 1.5089 | |
| 5 | S | A | 0.6313 | |
| 6 | S | A | 0.7505 | |
| 7 | V | A | 0.4308 | |
| 8 | P | A | 0.0000 | |
| 9 | T | A | -1.5805 | |
| 10 | K | A | -2.6312 | |
| 11 | L | A | 0.0000 | |
| 12 | E | A | -1.9462 | |
| 13 | V | A | 0.0688 | |
| 14 | V | A | 1.5048 | |
| 15 | A | A | 0.8660 | |
| 16 | A | A | 0.4337 | |
| 17 | T | A | -0.1637 | |
| 18 | P | A | -0.4651 | |
| 19 | T | A | -0.3914 | |
| 20 | S | A | -0.2217 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | 0.6905 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -0.7996 | |
| 25 | W | A | 0.0000 | |
| 26 | D | A | -2.5421 | |
| 27 | A | A | -1.2008 | |
| 28 | S | A | -0.5612 | |
| 29 | S | A | -0.2586 | |
| 30 | S | A | -0.4157 | |
| 31 | S | A | -0.1131 | |
| 32 | V | A | 0.0000 | |
| 33 | S | A | 0.4125 | |
| 34 | Y | A | 0.2962 | |
| 35 | Y | A | 0.0000 | |
| 36 | R | A | -0.4876 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | 0.0000 | |
| 39 | Y | A | 0.0000 | |
| 40 | G | A | 0.0000 | |
| 41 | E | A | -1.2673 | |
| 42 | T | A | -1.1913 | |
| 43 | G | A | -1.2904 | |
| 44 | G | A | -1.1925 | |
| 45 | N | A | -1.6280 | |
| 46 | S | A | -0.8218 | |
| 47 | P | A | -0.3426 | |
| 48 | V | A | 0.3246 | |
| 49 | Q | A | -1.1353 | |
| 50 | E | A | -1.7878 | |
| 51 | F | A | -0.7207 | |
| 52 | T | A | -0.2737 | |
| 53 | V | A | 0.0000 | |
| 54 | P | A | -0.3011 | |
| 55 | G | A | -0.2824 | |
| 56 | S | A | -0.3703 | |
| 57 | S | A | -0.4500 | |
| 58 | S | A | -0.6450 | |
| 59 | T | A | -0.2988 | |
| 60 | A | A | 0.0000 | |
| 61 | T | A | 0.2753 | |
| 62 | I | A | 0.0000 | |
| 63 | S | A | -0.4667 | |
| 64 | G | A | -0.6678 | |
| 65 | L | A | 0.0000 | |
| 66 | S | A | -0.6859 | |
| 67 | P | A | -0.7403 | |
| 68 | G | A | -0.8335 | |
| 69 | V | A | -0.7991 | |
| 70 | D | A | -1.5699 | |
| 71 | Y | A | -0.9446 | |
| 72 | T | A | -0.6924 | |
| 73 | I | A | 0.0000 | |
| 74 | T | A | -0.1833 | |
| 75 | V | A | 0.0000 | |
| 76 | Y | A | 0.4069 | |
| 77 | A | A | 0.0000 | |
| 78 | Y | A | 0.0000 | |
| 79 | E | A | 0.0000 | |
| 80 | L | A | 2.0096 | |
| 81 | Y | A | 1.1151 | |
| 82 | K | A | -0.9112 | |
| 83 | G | A | -0.0650 | |
| 84 | Y | A | 1.6327 | |
| 85 | T | A | 1.2466 | |
| 86 | Y | A | 2.3726 | |
| 87 | P | A | 2.1497 | |
| 88 | Y | A | 2.5045 | |
| 89 | Y | A | 1.9937 | |
| 90 | S | A | 0.0000 | |
| 91 | S | A | 0.3748 | |
| 92 | P | A | 0.2343 | |
| 93 | I | A | 0.1096 | |
| 94 | S | A | -0.3739 | |
| 95 | I | A | -0.7149 | |
| 96 | N | A | -1.6667 | |
| 97 | Y | A | -1.3009 | |
| 98 | R | A | -2.0887 | |
| 99 | T | A | 0.0000 | |
| 100 | C | A | 0.0025 |