Project name: query_structure

Status: done

Started: 2026-03-16 23:37:12
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYELYKGYTYPYYSSPISINYRTC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:27)
Show buried residues

Minimal score value
-2.6312
Maximal score value
2.5045
Average score
-0.1812
Total score value
-18.117

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3932
2 S A -0.0094
3 S A 0.4214
4 V A 1.5089
5 S A 0.6313
6 S A 0.7505
7 V A 0.4308
8 P A 0.0000
9 T A -1.5805
10 K A -2.6312
11 L A 0.0000
12 E A -1.9462
13 V A 0.0688
14 V A 1.5048
15 A A 0.8660
16 A A 0.4337
17 T A -0.1637
18 P A -0.4651
19 T A -0.3914
20 S A -0.2217
21 L A 0.0000
22 L A 0.6905
23 I A 0.0000
24 S A -0.7996
25 W A 0.0000
26 D A -2.5421
27 A A -1.2008
28 S A -0.5612
29 S A -0.2586
30 S A -0.4157
31 S A -0.1131
32 V A 0.0000
33 S A 0.4125
34 Y A 0.2962
35 Y A 0.0000
36 R A -0.4876
37 I A 0.0000
38 T A 0.0000
39 Y A 0.0000
40 G A 0.0000
41 E A -1.2673
42 T A -1.1913
43 G A -1.2904
44 G A -1.1925
45 N A -1.6280
46 S A -0.8218
47 P A -0.3426
48 V A 0.3246
49 Q A -1.1353
50 E A -1.7878
51 F A -0.7207
52 T A -0.2737
53 V A 0.0000
54 P A -0.3011
55 G A -0.2824
56 S A -0.3703
57 S A -0.4500
58 S A -0.6450
59 T A -0.2988
60 A A 0.0000
61 T A 0.2753
62 I A 0.0000
63 S A -0.4667
64 G A -0.6678
65 L A 0.0000
66 S A -0.6859
67 P A -0.7403
68 G A -0.8335
69 V A -0.7991
70 D A -1.5699
71 Y A -0.9446
72 T A -0.6924
73 I A 0.0000
74 T A -0.1833
75 V A 0.0000
76 Y A 0.4069
77 A A 0.0000
78 Y A 0.0000
79 E A 0.0000
80 L A 2.0096
81 Y A 1.1151
82 K A -0.9112
83 G A -0.0650
84 Y A 1.6327
85 T A 1.2466
86 Y A 2.3726
87 P A 2.1497
88 Y A 2.5045
89 Y A 1.9937
90 S A 0.0000
91 S A 0.3748
92 P A 0.2343
93 I A 0.1096
94 S A -0.3739
95 I A -0.7149
96 N A -1.6667
97 Y A -1.3009
98 R A -2.0887
99 T A 0.0000
100 C A 0.0025
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Laboratory of Theory of Biopolymers 2018