| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYFQGAMAVERNSGDLQLPQEIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEAFGTLPGVWLKSGPELPEKSLRVDALITATIEGRKVMLYTQKVRHFKEVDEPNALHLWVTDNNRTFHLGPFSVDSAENKTFANTLLYSDDALHLLQAKGDHESTAVSLARLTEELNTI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:51)
[INFO] Main: Simulation completed successfully. (00:06:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7662 | |
| 2 | G | A | -0.1802 | |
| 3 | S | A | -0.6736 | |
| 4 | S | A | -1.1356 | |
| 5 | H | A | -1.9115 | |
| 6 | H | A | -2.4027 | |
| 7 | H | A | -2.5797 | |
| 8 | H | A | -2.4858 | |
| 9 | H | A | -2.4312 | |
| 10 | H | A | -2.0931 | |
| 11 | S | A | -1.5996 | |
| 12 | S | A | -1.5668 | |
| 13 | G | A | -1.7588 | |
| 14 | E | A | -2.1048 | |
| 15 | N | A | -0.9440 | |
| 16 | L | A | 1.2758 | |
| 17 | Y | A | 1.8766 | |
| 18 | F | A | 2.2297 | |
| 19 | Q | A | 0.2956 | |
| 20 | G | A | -0.2241 | |
| 21 | A | A | -0.0937 | |
| 22 | M | A | 1.0019 | |
| 23 | A | A | 0.3211 | |
| 24 | V | A | 0.6264 | |
| 25 | E | A | -2.0457 | |
| 26 | R | A | -2.9936 | |
| 27 | N | A | -2.5920 | |
| 28 | S | A | -1.7432 | |
| 29 | G | A | -1.6385 | |
| 30 | D | A | -1.5674 | |
| 31 | L | A | 0.0902 | |
| 32 | Q | A | -0.9775 | |
| 33 | L | A | -0.2663 | |
| 34 | P | A | -0.9813 | |
| 35 | Q | A | -1.6129 | |
| 36 | E | A | -1.8078 | |
| 37 | I | A | -0.5993 | |
| 38 | A | A | -0.0567 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | 0.0000 | |
| 41 | V | A | -0.2657 | |
| 42 | P | A | -1.1437 | |
| 43 | N | A | -2.1343 | |
| 44 | K | A | -2.3506 | |
| 45 | T | A | 0.0000 | |
| 46 | Q | A | -1.8561 | |
| 47 | V | A | 0.0000 | |
| 48 | V | A | -1.5057 | |
| 49 | P | A | -1.7663 | |
| 50 | K | A | -1.4971 | |
| 51 | S | A | -1.2904 | |
| 52 | G | A | -1.4438 | |
| 53 | G | A | -1.9774 | |
| 54 | E | A | -2.7312 | |
| 55 | G | A | -2.2726 | |
| 56 | K | A | -2.4987 | |
| 57 | V | A | -1.0948 | |
| 58 | K | A | 0.0000 | |
| 59 | D | A | -1.2709 | |
| 60 | I | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | A | A | -0.0155 | |
| 63 | S | A | 0.0098 | |
| 64 | P | A | 0.0000 | |
| 65 | A | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | R | A | -0.9469 | |
| 69 | A | A | 0.0000 | |
| 70 | G | A | -1.4220 | |
| 71 | G | A | -1.2487 | |
| 72 | V | A | 0.0000 | |
| 73 | M | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | E | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | R | A | 0.0000 | |
| 81 | T | A | -1.1480 | |
| 82 | K | A | -1.5447 | |
| 83 | N | A | -1.4932 | |
| 84 | K | A | -1.6904 | |
| 85 | L | A | -0.1819 | |
| 86 | F | A | -0.5254 | |
| 87 | P | A | -1.0112 | |
| 88 | E | A | -1.3805 | |
| 89 | V | A | 0.2816 | |
| 90 | I | A | 0.4585 | |
| 91 | D | A | -1.5283 | |
| 92 | L | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | S | A | 0.0000 | |
| 95 | S | A | 0.0000 | |
| 96 | D | A | -0.8301 | |
| 97 | I | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | G | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | K | A | -0.9675 | |
| 104 | A | A | -0.9429 | |
| 105 | P | A | 0.0000 | |
| 106 | E | A | -2.3712 | |
| 107 | T | A | -1.2418 | |
| 108 | W | A | -1.0519 | |
| 109 | Q | A | -1.3016 | |
| 110 | S | A | -1.0165 | |
| 111 | L | A | 0.0000 | |
| 112 | V | A | -0.2778 | |
| 113 | A | A | -0.3925 | |
| 114 | E | A | 0.0000 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.5789 | |
| 117 | K | A | -1.2258 | |
| 118 | E | A | -1.5960 | |
| 119 | Y | A | -0.0125 | |
| 120 | W | A | -0.4386 | |
| 121 | Q | A | -0.9016 | |
| 122 | A | A | 0.0000 | |
| 123 | H | A | -0.8398 | |
| 124 | T | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | E | A | -1.7436 | |
| 128 | S | A | -1.3235 | |
| 129 | A | A | -1.4201 | |
| 130 | N | A | -2.4605 | |
| 131 | N | A | -2.6473 | |
| 132 | S | A | -2.1979 | |
| 133 | N | A | -2.1704 | |
| 134 | H | A | -1.5037 | |
| 135 | R | A | -2.7383 | |
| 136 | V | A | 0.0000 | |
| 137 | G | A | 0.0000 | |
| 138 | V | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | R | A | -0.4903 | |
| 141 | L | A | -0.0581 | |
| 142 | P | A | 0.0000 | |
| 143 | T | A | 0.0000 | |
| 144 | G | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | T | A | -1.0403 | |
| 147 | R | A | -1.8406 | |
| 148 | G | A | -1.6667 | |
| 149 | N | A | -2.0558 | |
| 150 | K | A | -2.4479 | |
| 151 | V | A | 0.0000 | |
| 152 | F | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | V | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | S | A | -0.5932 | |
| 158 | Y | A | -0.7074 | |
| 159 | E | A | -1.5207 | |
| 160 | E | A | -1.6544 | |
| 161 | R | A | -1.7284 | |
| 162 | R | A | -1.1649 | |
| 163 | E | A | -0.8581 | |
| 164 | I | A | 0.6465 | |
| 165 | D | A | -1.4552 | |
| 166 | D | A | -1.4279 | |
| 167 | Y | A | 0.5789 | |
| 168 | I | A | 0.1857 | |
| 169 | W | A | -0.5147 | |
| 170 | K | A | -1.5198 | |
| 171 | A | A | -1.1519 | |
| 172 | E | A | -1.0925 | |
| 173 | A | A | -0.6479 | |
| 174 | W | A | -0.8026 | |
| 175 | N | A | -1.2871 | |
| 176 | I | A | 0.0000 | |
| 177 | K | A | -0.9757 | |
| 178 | V | A | 0.0000 | |
| 179 | I | A | 0.0000 | |
| 180 | E | A | -1.6184 | |
| 181 | G | A | 0.0000 | |
| 182 | E | A | -2.7678 | |
| 183 | A | A | 0.0000 | |
| 184 | T | A | -1.7576 | |
| 185 | Q | A | -1.8067 | |
| 186 | S | A | -1.2602 | |
| 187 | T | A | -1.0160 | |
| 188 | E | A | -1.6359 | |
| 189 | V | A | 0.2890 | |
| 190 | Q | A | -1.0856 | |
| 191 | P | A | -1.1858 | |
| 192 | T | A | -0.5721 | |
| 193 | Q | A | -0.8000 | |
| 194 | P | A | 0.0000 | |
| 195 | I | A | 0.0000 | |
| 196 | N | A | -1.9354 | |
| 197 | W | A | -1.6652 | |
| 198 | S | A | -1.7382 | |
| 199 | E | A | -2.1858 | |
| 200 | P | A | -1.4984 | |
| 201 | K | A | -1.6502 | |
| 202 | P | A | -1.1686 | |
| 203 | L | A | 0.0000 | |
| 204 | F | A | -1.3273 | |
| 205 | Q | A | -2.1012 | |
| 206 | T | A | -1.5851 | |
| 207 | D | A | -2.5881 | |
| 208 | S | A | -2.4349 | |
| 209 | P | A | -2.4636 | |
| 210 | N | A | -3.5540 | |
| 211 | N | A | -3.3489 | |
| 212 | K | A | -3.3829 | |
| 213 | G | A | -3.1771 | |
| 214 | D | A | -3.9213 | |
| 215 | L | A | -3.0483 | |
| 216 | K | A | -3.2549 | |
| 217 | E | A | -1.8926 | |
| 218 | F | A | 0.0000 | |
| 219 | L | A | -0.3516 | |
| 220 | G | A | 0.0000 | |
| 221 | G | A | 0.0000 | |
| 222 | G | A | 0.0000 | |
| 223 | G | A | 0.0000 | |
| 224 | S | A | 0.1253 | |
| 225 | G | A | 0.0000 | |
| 226 | I | A | 0.3908 | |
| 227 | V | A | 0.2754 | |
| 228 | M | A | 0.0000 | |
| 229 | G | A | -1.5326 | |
| 230 | N | A | -1.7113 | |
| 231 | G | A | -1.1104 | |
| 232 | T | A | 0.0000 | |
| 233 | L | A | 0.0000 | |
| 234 | V | A | 0.0000 | |
| 235 | F | A | 0.0000 | |
| 236 | P | A | 0.0000 | |
| 237 | L | A | 0.0000 | |
| 238 | T | A | -0.4019 | |
| 239 | A | A | 0.0000 | |
| 240 | K | A | -2.3379 | |
| 241 | D | A | -3.2957 | |
| 242 | E | A | -3.6658 | |
| 243 | S | A | -2.5772 | |
| 244 | N | A | -3.0662 | |
| 245 | K | A | -2.2003 | |
| 246 | V | A | -1.0545 | |
| 247 | F | A | -0.0039 | |
| 248 | S | A | 0.0000 | |
| 249 | L | A | 0.0000 | |
| 250 | I | A | 0.0000 | |
| 251 | T | A | 0.0000 | |
| 252 | Y | A | -0.6888 | |
| 253 | S | A | 0.0000 | |
| 254 | T | A | -1.7081 | |
| 255 | D | A | -2.1600 | |
| 256 | D | A | -2.8875 | |
| 257 | G | A | 0.0000 | |
| 258 | Q | A | -2.7648 | |
| 259 | K | A | -3.1365 | |
| 260 | W | A | -2.0855 | |
| 261 | E | A | -2.0031 | |
| 262 | I | A | -0.9700 | |
| 263 | P | A | 0.0000 | |
| 264 | G | A | -1.7944 | |
| 265 | G | A | -0.8805 | |
| 266 | V | A | 0.4759 | |
| 267 | S | A | 0.0000 | |
| 268 | S | A | 0.2782 | |
| 269 | V | A | 0.6939 | |
| 270 | A | A | -0.7466 | |
| 271 | C | A | 0.0000 | |
| 272 | R | A | -1.1812 | |
| 273 | S | A | -0.6565 | |
| 274 | P | A | 0.0000 | |
| 275 | R | A | -0.2910 | |
| 276 | V | A | 0.0000 | |
| 277 | T | A | 0.0000 | |
| 278 | E | A | -0.9360 | |
| 279 | W | A | 0.0000 | |
| 280 | E | A | -2.8438 | |
| 281 | E | A | -3.1797 | |
| 282 | G | A | -2.3699 | |
| 283 | T | A | 0.0000 | |
| 284 | L | A | 0.0000 | |
| 285 | L | A | 0.0000 | |
| 286 | M | A | 0.0000 | |
| 287 | V | A | 0.0000 | |
| 288 | T | A | 0.0000 | |
| 289 | Y | A | -1.5621 | |
| 290 | C | A | 0.0000 | |
| 291 | E | A | -3.1932 | |
| 292 | D | A | -3.2036 | |
| 293 | G | A | 0.0000 | |
| 294 | R | A | 0.0000 | |
| 295 | K | A | -0.8633 | |
| 296 | V | A | 0.0000 | |
| 297 | F | A | 0.0000 | |
| 298 | E | A | -0.9822 | |
| 299 | S | A | 0.0000 | |
| 300 | R | A | -2.8937 | |
| 301 | D | A | -1.9968 | |
| 302 | M | A | -1.1415 | |
| 303 | G | A | 0.0000 | |
| 304 | K | A | -2.1255 | |
| 305 | T | A | -1.3493 | |
| 306 | W | A | -0.9543 | |
| 307 | T | A | -0.5739 | |
| 308 | E | A | -0.6977 | |
| 309 | A | A | 0.1279 | |
| 310 | F | A | 1.3580 | |
| 311 | G | A | 0.0589 | |
| 312 | T | A | -0.2251 | |
| 313 | L | A | 0.0000 | |
| 314 | P | A | -0.3062 | |
| 315 | G | A | 0.1415 | |
| 316 | V | A | 0.0000 | |
| 317 | W | A | 0.0611 | |
| 318 | L | A | -0.6959 | |
| 319 | K | A | -2.3369 | |
| 320 | S | A | -2.5007 | |
| 321 | G | A | -2.0065 | |
| 322 | P | A | -1.4322 | |
| 323 | E | A | -2.2231 | |
| 324 | L | A | -1.9736 | |
| 325 | P | A | -2.0536 | |
| 326 | E | A | -3.3050 | |
| 327 | K | A | -2.6549 | |
| 328 | S | A | -1.5646 | |
| 329 | L | A | 0.0000 | |
| 330 | R | A | -1.0746 | |
| 331 | V | A | 0.0000 | |
| 332 | D | A | 0.0000 | |
| 333 | A | A | 0.0000 | |
| 334 | L | A | 0.0000 | |
| 335 | I | A | 0.2591 | |
| 336 | T | A | -0.0932 | |
| 337 | A | A | 0.0000 | |
| 338 | T | A | -1.7959 | |
| 339 | I | A | -2.0409 | |
| 340 | E | A | -2.8089 | |
| 341 | G | A | -2.4364 | |
| 342 | R | A | -3.0905 | |
| 343 | K | A | -2.5069 | |
| 344 | V | A | 0.0000 | |
| 345 | M | A | 0.0000 | |
| 346 | L | A | 0.0000 | |
| 347 | Y | A | 0.0000 | |
| 348 | T | A | 0.0000 | |
| 349 | Q | A | 0.0000 | |
| 350 | K | A | 0.0000 | |
| 351 | V | A | 0.0699 | |
| 352 | R | A | -0.9296 | |
| 353 | H | A | -1.4322 | |
| 354 | F | A | -0.0079 | |
| 355 | K | A | -2.0191 | |
| 356 | E | A | -2.4033 | |
| 357 | V | A | -0.3609 | |
| 358 | D | A | -2.2260 | |
| 359 | E | A | -2.2361 | |
| 360 | P | A | -1.2520 | |
| 361 | N | A | -0.6558 | |
| 362 | A | A | 0.0000 | |
| 363 | L | A | 0.0000 | |
| 364 | H | A | 0.0000 | |
| 365 | L | A | 0.0000 | |
| 366 | W | A | 0.1308 | |
| 367 | V | A | 0.0000 | |
| 368 | T | A | 0.0000 | |
| 369 | D | A | -1.9580 | |
| 370 | N | A | -2.0340 | |
| 371 | N | A | -2.5273 | |
| 372 | R | A | -2.3020 | |
| 373 | T | A | 0.0000 | |
| 374 | F | A | 0.0980 | |
| 375 | H | A | -0.2752 | |
| 376 | L | A | -0.6202 | |
| 377 | G | A | -0.1472 | |
| 378 | P | A | 0.2890 | |
| 379 | F | A | 0.0000 | |
| 380 | S | A | 0.0000 | |
| 381 | V | A | 0.4954 | |
| 382 | D | A | -0.7362 | |
| 383 | S | A | -1.2776 | |
| 384 | A | A | -1.4439 | |
| 385 | E | A | -2.9908 | |
| 386 | N | A | -2.3484 | |
| 387 | K | A | -1.7548 | |
| 388 | T | A | 0.0000 | |
| 389 | F | A | -0.4747 | |
| 390 | A | A | -0.1554 | |
| 391 | N | A | 0.0000 | |
| 392 | T | A | 0.0000 | |
| 393 | L | A | 0.0000 | |
| 394 | L | A | 0.0614 | |
| 395 | Y | A | -0.4575 | |
| 396 | S | A | -1.3859 | |
| 397 | D | A | -2.9355 | |
| 398 | D | A | -2.7764 | |
| 399 | A | A | -1.7411 | |
| 400 | L | A | 0.0000 | |
| 401 | H | A | 0.0000 | |
| 402 | L | A | 0.0000 | |
| 403 | L | A | 0.0000 | |
| 404 | Q | A | 0.0000 | |
| 405 | A | A | 0.0000 | |
| 406 | K | A | -1.1318 | |
| 407 | G | A | 0.0000 | |
| 408 | D | A | -2.7527 | |
| 409 | H | A | -2.6609 | |
| 410 | E | A | -2.9687 | |
| 411 | S | A | -2.0568 | |
| 412 | T | A | 0.0000 | |
| 413 | A | A | -0.2346 | |
| 414 | V | A | 0.0000 | |
| 415 | S | A | -0.2930 | |
| 416 | L | A | 0.0000 | |
| 417 | A | A | 0.0000 | |
| 418 | R | A | -0.9324 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5314 | |
| 421 | E | A | -2.4086 | |
| 422 | E | A | -1.3924 | |
| 423 | L | A | -1.1850 | |
| 424 | N | A | -1.7724 | |
| 425 | T | A | -0.9165 | |
| 426 | I | A | -0.3703 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine