| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVHFYFITYGETGVYGAGPQAFKVPGSKSTATISGLSPGVDYTITVYARRYHYPGGYYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:40)
[INFO] Main: Simulation completed successfully. (00:01:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8115 | |
| 2 | S | A | 0.8703 | |
| 3 | S | A | 0.5797 | |
| 4 | V | A | 0.5528 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5908 | |
| 7 | K | A | -2.6083 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9203 | |
| 10 | V | A | 0.0953 | |
| 11 | V | A | 1.5422 | |
| 12 | A | A | 0.8976 | |
| 13 | A | A | 0.3135 | |
| 14 | T | A | -0.2036 | |
| 15 | P | A | -0.8048 | |
| 16 | T | A | -0.5339 | |
| 17 | S | A | -0.3185 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7489 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9574 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.5959 | |
| 24 | A | A | -1.2486 | |
| 25 | P | A | 0.0273 | |
| 26 | A | A | 0.4327 | |
| 27 | V | A | 0.3450 | |
| 28 | T | A | -0.4035 | |
| 29 | V | A | 0.0000 | |
| 30 | H | A | -1.3873 | |
| 31 | F | A | -1.1500 | |
| 32 | Y | A | 0.0000 | |
| 33 | F | A | 0.2287 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.3504 | |
| 36 | Y | A | -0.6280 | |
| 37 | G | A | -0.7655 | |
| 38 | E | A | -1.0943 | |
| 39 | T | A | -0.8075 | |
| 40 | G | A | 0.2044 | |
| 41 | V | A | 1.4847 | |
| 42 | Y | A | 1.5686 | |
| 43 | G | A | 0.4180 | |
| 44 | A | A | 0.0074 | |
| 45 | G | A | -0.5702 | |
| 46 | P | A | -0.7859 | |
| 47 | Q | A | -1.2329 | |
| 48 | A | A | -0.5331 | |
| 49 | F | A | -0.2759 | |
| 50 | K | A | -1.2055 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.2234 | |
| 53 | G | A | -1.5227 | |
| 54 | S | A | -1.2702 | |
| 55 | K | A | -2.1248 | |
| 56 | S | A | -1.3856 | |
| 57 | T | A | -0.7488 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2374 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.4771 | |
| 62 | G | A | -0.6868 | |
| 63 | L | A | 0.0000 | |
| 64 | S | A | -0.9813 | |
| 65 | P | A | -1.1099 | |
| 66 | G | A | -1.2928 | |
| 67 | V | A | -1.3894 | |
| 68 | D | A | -2.5831 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.0879 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.4232 | |
| 75 | A | A | 0.0000 | |
| 76 | R | A | -0.7781 | |
| 77 | R | A | -1.0654 | |
| 78 | Y | A | 0.0776 | |
| 79 | H | A | -0.2552 | |
| 80 | Y | A | 0.7400 | |
| 81 | P | A | 0.2353 | |
| 82 | G | A | 0.0822 | |
| 83 | G | A | 0.3931 | |
| 84 | Y | A | 1.2506 | |
| 85 | Y | A | 0.8910 | |
| 86 | S | A | 0.0000 | |
| 87 | P | A | 0.4968 | |
| 88 | I | A | 0.2205 | |
| 89 | S | A | -0.5118 | |
| 90 | I | A | -0.7213 | |
| 91 | N | A | -1.9668 | |
| 92 | Y | A | -1.7841 | |
| 93 | R | A | -2.7503 | |
| 94 | T | A | -1.3953 |