| Chain sequence(s) |
A: SGHKGHK
C: SGHKGHK B: SGHKGHK E: SGHKGHK D: SGHKGHK G: SGHKGHK F: SGHKGHK I: SGHKGHK H: SGHKGHK K: SGHKGHK J: SGHKGHK M: SGHKGHK L: SGHKGHK O: SGHKGHK N: SGHKGHK Q: SGHKGHK P: SGHKGHK S: SGHKGHK R: SGHKGHK T: SGHKGHK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:50)
[INFO] Main: Simulation completed successfully. (00:05:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -2.6627 | |
| 2 | G | A | -2.2009 | |
| 3 | H | A | -3.5565 | |
| 4 | K | A | -3.2963 | |
| 5 | G | A | -3.0792 | |
| 6 | H | A | -2.7964 | |
| 7 | K | A | -2.8702 | |
| 1 | S | B | -2.8549 | |
| 2 | G | B | 0.0000 | |
| 3 | H | B | -2.4345 | |
| 4 | K | B | -2.8525 | |
| 5 | G | B | -2.2455 | |
| 6 | H | B | -2.3380 | |
| 7 | K | B | -2.8713 | |
| 1 | S | C | -1.3513 | |
| 2 | G | C | -2.3005 | |
| 3 | H | C | -2.5784 | |
| 4 | K | C | -3.0220 | |
| 5 | G | C | -2.3820 | |
| 6 | H | C | -3.0950 | |
| 7 | K | C | -3.5269 | |
| 1 | S | D | 0.0000 | |
| 2 | G | D | -2.7290 | |
| 3 | H | D | -3.1119 | |
| 4 | K | D | -3.6402 | |
| 5 | G | D | -3.3686 | |
| 6 | H | D | -3.0000 | |
| 7 | K | D | -2.6693 | |
| 1 | S | E | -1.0578 | |
| 2 | G | E | -2.2854 | |
| 3 | H | E | -2.6859 | |
| 4 | K | E | -3.2975 | |
| 5 | G | E | -2.5538 | |
| 6 | H | E | -2.9284 | |
| 7 | K | E | -2.7327 | |
| 1 | S | F | -3.3260 | |
| 2 | G | F | -3.8771 | |
| 3 | H | F | -3.9430 | |
| 4 | K | F | -4.2847 | |
| 5 | G | F | -3.3970 | |
| 6 | H | F | -2.8344 | |
| 7 | K | F | -2.6576 | |
| 1 | S | G | -1.3472 | |
| 2 | G | G | -2.3634 | |
| 3 | H | G | -2.9832 | |
| 4 | K | G | -3.8868 | |
| 5 | G | G | -3.5182 | |
| 6 | H | G | -3.7671 | |
| 7 | K | G | -3.0901 | |
| 1 | S | H | -2.7485 | |
| 2 | G | H | -3.2864 | |
| 3 | H | H | -3.1398 | |
| 4 | K | H | -3.9699 | |
| 5 | G | H | -3.3277 | |
| 6 | H | H | -2.8319 | |
| 7 | K | H | -2.6346 | |
| 1 | S | I | -0.9658 | |
| 2 | G | I | -1.9798 | |
| 3 | H | I | -2.7355 | |
| 4 | K | I | -3.7917 | |
| 5 | G | I | -3.1118 | |
| 6 | H | I | -3.0344 | |
| 7 | K | I | -3.2969 | |
| 1 | S | J | -2.7232 | |
| 2 | G | J | -2.1726 | |
| 3 | H | J | -3.2609 | |
| 4 | K | J | -3.7459 | |
| 5 | G | J | -2.8249 | |
| 6 | H | J | -3.2682 | |
| 7 | K | J | -2.9039 | |
| 1 | S | K | -1.7654 | |
| 2 | G | K | -1.6887 | |
| 3 | H | K | -2.4761 | |
| 4 | K | K | -3.4823 | |
| 5 | G | K | -3.0362 | |
| 6 | H | K | -3.0100 | |
| 7 | K | K | -2.7244 | |
| 1 | S | L | -2.6217 | |
| 2 | G | L | -2.3184 | |
| 3 | H | L | -2.8798 | |
| 4 | K | L | -3.7222 | |
| 5 | G | L | -3.1674 | |
| 6 | H | L | -2.9154 | |
| 7 | K | L | -2.6396 | |
| 1 | S | M | -3.0751 | |
| 2 | G | M | -3.3422 | |
| 3 | H | M | -3.2868 | |
| 4 | K | M | -3.5664 | |
| 5 | G | M | -3.2603 | |
| 6 | H | M | -3.0058 | |
| 7 | K | M | -3.0485 | |
| 1 | S | N | -2.4619 | |
| 2 | G | N | -2.9519 | |
| 3 | H | N | -2.7067 | |
| 4 | K | N | -3.7575 | |
| 5 | G | N | -2.7529 | |
| 6 | H | N | -2.8822 | |
| 7 | K | N | -3.4107 | |
| 1 | S | O | -3.2524 | |
| 2 | G | O | -2.7300 | |
| 3 | H | O | -3.4693 | |
| 4 | K | O | -3.7812 | |
| 5 | G | O | -3.5472 | |
| 6 | H | O | -3.9791 | |
| 7 | K | O | -4.5683 | |
| 1 | S | P | -3.0952 | |
| 2 | G | P | -2.9955 | |
| 3 | H | P | -3.8278 | |
| 4 | K | P | -4.7868 | |
| 5 | G | P | -3.7109 | |
| 6 | H | P | -3.5082 | |
| 7 | K | P | -3.3005 | |
| 1 | S | Q | -0.9784 | |
| 2 | G | Q | -1.8018 | |
| 3 | H | Q | -3.0207 | |
| 4 | K | Q | -3.7332 | |
| 5 | G | Q | -2.7400 | |
| 6 | H | Q | -3.0334 | |
| 7 | K | Q | -2.6819 | |
| 1 | S | R | -1.7077 | |
| 2 | G | R | -2.2828 | |
| 3 | H | R | -2.9810 | |
| 4 | K | R | -3.3555 | |
| 5 | G | R | -3.1229 | |
| 6 | H | R | -2.8630 | |
| 7 | K | R | -2.8621 | |
| 1 | S | S | -2.1071 | |
| 2 | G | S | -2.2662 | |
| 3 | H | S | -2.4004 | |
| 4 | K | S | -3.2639 | |
| 5 | G | S | -2.6553 | |
| 6 | H | S | -2.6977 | |
| 7 | K | S | -2.6791 | |
| 1 | S | T | -1.8568 | |
| 2 | G | T | -1.9851 | |
| 3 | H | T | -2.8745 | |
| 4 | K | T | -3.2264 | |
| 5 | G | T | -2.7863 | |
| 6 | H | T | -2.9387 | |
| 7 | K | T | -2.6411 |