| Chain sequence(s) |
H: EVQLVESGGGEEQPGGSLRLSCAGSGFDLSKGAMTWVRQAPGKGLEWVSSITRSGKGTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCALTNSLTSSGIGIGSMYGWGQGTTVTVSSAS
L: DIQMTQSPLSLPVTPGEPASISSKTSDSYGNSYVGWYLQKSGQSPQLLIYRASIRAGGVPDRFSGSGSGTDFTLKISRVEAEDVGFYYVVDTKTYPIGFGQGTKLEIKRTV input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:43)
[INFO] Main: Simulation completed successfully. (00:03:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6095 | |
| 2 | V | H | -0.4748 | |
| 3 | Q | H | -0.9995 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.3759 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5339 | |
| 8 | G | H | -1.2133 | |
| 9 | G | H | -1.1752 | |
| 10 | G | H | -1.5336 | |
| 11 | E | H | -2.5451 | |
| 12 | E | H | -2.3701 | |
| 13 | Q | H | -2.3963 | |
| 14 | P | H | -2.0937 | |
| 15 | G | H | -1.5132 | |
| 16 | G | H | -1.4935 | |
| 17 | S | H | -1.5959 | |
| 18 | L | H | -1.5260 | |
| 19 | R | H | -2.1476 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4599 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2994 | |
| 24 | G | H | -0.5698 | |
| 25 | S | H | -0.7734 | |
| 26 | G | H | -1.0298 | |
| 27 | F | H | -0.9190 | |
| 28 | D | H | -1.8269 | |
| 29 | L | H | 0.0000 | |
| 30 | S | H | -2.2219 | |
| 31 | K | H | -2.5876 | |
| 32 | G | H | 0.0000 | |
| 33 | A | H | 0.0000 | |
| 34 | M | H | 0.0000 | |
| 35 | T | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.8778 | |
| 40 | A | H | -1.2696 | |
| 41 | P | H | -1.0223 | |
| 42 | G | H | -1.4783 | |
| 43 | K | H | -2.3993 | |
| 44 | G | H | -1.5365 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -1.2077 | |
| 47 | W | H | 0.0000 | |
| 48 | V | H | 0.0000 | |
| 49 | S | H | 0.0000 | |
| 50 | S | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | T | H | -1.6059 | |
| 53 | R | H | -2.4585 | |
| 54 | S | H | -1.9177 | |
| 55 | G | H | -1.7561 | |
| 56 | K | H | -2.1211 | |
| 57 | G | H | -1.2310 | |
| 58 | T | H | -0.4472 | |
| 59 | Y | H | 0.0580 | |
| 60 | Y | H | -0.6986 | |
| 61 | A | H | 0.0000 | |
| 62 | D | H | -2.6183 | |
| 63 | S | H | -1.7550 | |
| 64 | V | H | 0.0000 | |
| 65 | K | H | -2.5237 | |
| 66 | G | H | -1.7650 | |
| 67 | R | H | -1.6203 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.8130 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.6922 | |
| 72 | R | H | -1.3511 | |
| 73 | D | H | -1.5675 | |
| 74 | N | H | -2.2164 | |
| 75 | S | H | -1.6853 | |
| 76 | K | H | -2.3989 | |
| 77 | N | H | -1.9722 | |
| 78 | T | H | 0.0000 | |
| 79 | L | H | 0.0000 | |
| 80 | Y | H | -0.5913 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.3076 | |
| 83 | M | H | 0.0000 | |
| 84 | N | H | -1.5205 | |
| 85 | S | H | -1.2839 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -2.3771 | |
| 88 | A | H | -1.8259 | |
| 89 | E | H | -2.2228 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -1.1505 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | 0.0922 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | L | H | 0.0000 | |
| 99 | T | H | 0.0000 | |
| 100 | N | H | -0.9809 | |
| 101 | S | H | -0.8510 | |
| 102 | L | H | -0.1820 | |
| 103 | T | H | -0.1395 | |
| 104 | S | H | -0.0892 | |
| 105 | S | H | -0.0929 | |
| 106 | G | H | 0.0310 | |
| 107 | I | H | 0.8928 | |
| 108 | G | H | 0.2953 | |
| 109 | I | H | 0.0000 | |
| 110 | G | H | 0.0000 | |
| 111 | S | H | 0.0000 | |
| 112 | M | H | 0.0000 | |
| 113 | Y | H | 0.4307 | |
| 114 | G | H | 0.0655 | |
| 115 | W | H | -0.4498 | |
| 116 | G | H | 0.0000 | |
| 117 | Q | H | -1.3591 | |
| 118 | G | H | -0.5455 | |
| 119 | T | H | -0.2386 | |
| 120 | T | H | -0.5239 | |
| 121 | V | H | 0.0000 | |
| 122 | T | H | -1.5353 | |
| 123 | V | H | 0.0000 | |
| 124 | S | H | -1.6286 | |
| 125 | S | H | -1.1982 | |
| 126 | A | H | -0.6457 | |
| 127 | S | H | -0.6737 | |
| 1 | D | L | -2.1837 | |
| 2 | I | L | -1.2977 | |
| 3 | Q | L | -1.8500 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.0698 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.3519 | |
| 8 | P | L | -0.1006 | |
| 9 | L | L | 0.2887 | |
| 10 | S | L | -0.1772 | |
| 11 | L | L | -0.3533 | |
| 12 | P | L | -1.1788 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -2.1658 | |
| 15 | P | L | -2.4020 | |
| 16 | G | L | -2.1380 | |
| 17 | E | L | -2.7813 | |
| 18 | P | L | -2.3831 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -0.7970 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.9398 | |
| 23 | S | L | 0.0000 | |
| 24 | K | L | -1.9903 | |
| 25 | T | L | 0.0000 | |
| 26 | S | L | -1.0566 | |
| 27 | D | L | 0.0000 | |
| 28 | S | L | 0.1123 | |
| 29 | Y | L | 0.6330 | |
| 30 | G | L | -0.6753 | |
| 31 | N | L | -1.2349 | |
| 32 | S | L | -1.2373 | |
| 33 | Y | L | 0.0000 | |
| 34 | V | L | 0.0000 | |
| 35 | G | L | 0.0000 | |
| 36 | W | L | 0.0000 | |
| 37 | Y | L | 0.0000 | |
| 38 | L | L | -0.3761 | |
| 39 | Q | L | 0.0000 | |
| 40 | K | L | -1.4060 | |
| 41 | S | L | -0.9162 | |
| 42 | G | L | -1.4522 | |
| 43 | Q | L | -2.0812 | |
| 44 | S | L | -1.4510 | |
| 45 | P | L | 0.0000 | |
| 46 | Q | L | -1.1670 | |
| 47 | L | L | 0.0000 | |
| 48 | L | L | 0.0000 | |
| 49 | I | L | 0.0000 | |
| 50 | Y | L | -0.4049 | |
| 51 | R | L | -1.6356 | |
| 52 | A | L | -1.1179 | |
| 53 | S | L | -0.5962 | |
| 54 | I | L | -0.0663 | |
| 55 | R | L | -1.1273 | |
| 56 | A | L | -0.6189 | |
| 57 | G | L | -0.6439 | |
| 58 | G | L | -1.0010 | |
| 59 | V | L | -1.0945 | |
| 60 | P | L | -1.3734 | |
| 61 | D | L | -2.4216 | |
| 62 | R | L | -2.3037 | |
| 63 | F | L | 0.0000 | |
| 64 | S | L | -1.1978 | |
| 65 | G | L | 0.0000 | |
| 66 | S | L | -1.0700 | |
| 67 | G | L | -1.4766 | |
| 68 | S | L | -1.5823 | |
| 69 | G | L | -1.2347 | |
| 70 | T | L | -1.5496 | |
| 71 | D | L | -2.4886 | |
| 72 | F | L | 0.0000 | |
| 73 | T | L | -1.2002 | |
| 74 | L | L | 0.0000 | |
| 75 | K | L | -1.8786 | |
| 76 | I | L | 0.0000 | |
| 77 | S | L | -2.4802 | |
| 78 | R | L | -3.4825 | |
| 79 | V | L | 0.0000 | |
| 80 | E | L | -2.7728 | |
| 81 | A | L | -1.8813 | |
| 82 | E | L | -2.2855 | |
| 83 | D | L | 0.0000 | |
| 84 | V | L | -0.8687 | |
| 85 | G | L | 0.0000 | |
| 86 | F | L | 0.1678 | |
| 87 | Y | L | 0.0000 | |
| 88 | Y | L | 0.0000 | |
| 89 | V | L | 0.0000 | |
| 90 | V | L | 0.0000 | |
| 91 | D | L | 0.0000 | |
| 92 | T | L | 0.0000 | |
| 93 | K | L | -0.6780 | |
| 94 | T | L | -0.1973 | |
| 95 | Y | L | -0.0626 | |
| 96 | P | L | -0.6563 | |
| 97 | I | L | 0.0000 | |
| 98 | G | L | -0.9761 | |
| 99 | F | L | -0.6003 | |
| 100 | G | L | 0.0000 | |
| 101 | Q | L | -1.5549 | |
| 102 | G | L | 0.0000 | |
| 103 | T | L | 0.0000 | |
| 104 | K | L | -0.6604 | |
| 105 | L | L | 0.0000 | |
| 106 | E | L | -1.6345 | |
| 107 | I | L | -1.7304 | |
| 108 | K | L | -2.3315 | |
| 109 | R | L | -2.2372 | |
| 110 | T | L | -0.3828 | |
| 111 | V | L | 1.0864 |