Project name: des17_delL_VQ3L_LE11H

Status: done

Started: 2026-03-15 08:47:51
Settings
Chain sequence(s) H: EVQLVESGGGEEQPGGSLRLSCAGSGFDLSKGAMTWVRQAPGKGLEWVSSITRSGKGTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCALTNSLTSSGIGIGSMYGWGQGTTVTVSSAS
L: DIQMTQSPLSLPVTPGEPASISSKTSDSYGNSYVGWYLQKSGQSPQLLIYRASIRAGGVPDRFSGSGSGTDFTLKISRVEAEDVGFYYVVDTKTYPIGFGQGTKLEIKRTV
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:46)
Show buried residues

Minimal score value
-3.4825
Maximal score value
1.0864
Average score
-0.8091
Total score value
-192.5703

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.6095
2 V H -0.4748
3 Q H -0.9995
4 L H 0.0000
5 V H 0.3759
6 E H 0.0000
7 S H -0.5339
8 G H -1.2133
9 G H -1.1752
10 G H -1.5336
11 E H -2.5451
12 E H -2.3701
13 Q H -2.3963
14 P H -2.0937
15 G H -1.5132
16 G H -1.4935
17 S H -1.5959
18 L H -1.5260
19 R H -2.1476
20 L H 0.0000
21 S H -0.4599
22 C H 0.0000
23 A H -0.2994
24 G H -0.5698
25 S H -0.7734
26 G H -1.0298
27 F H -0.9190
28 D H -1.8269
29 L H 0.0000
30 S H -2.2219
31 K H -2.5876
32 G H 0.0000
33 A H 0.0000
34 M H 0.0000
35 T H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -0.8778
40 A H -1.2696
41 P H -1.0223
42 G H -1.4783
43 K H -2.3993
44 G H -1.5365
45 L H 0.0000
46 E H -1.2077
47 W H 0.0000
48 V H 0.0000
49 S H 0.0000
50 S H 0.0000
51 I H 0.0000
52 T H -1.6059
53 R H -2.4585
54 S H -1.9177
55 G H -1.7561
56 K H -2.1211
57 G H -1.2310
58 T H -0.4472
59 Y H 0.0580
60 Y H -0.6986
61 A H 0.0000
62 D H -2.6183
63 S H -1.7550
64 V H 0.0000
65 K H -2.5237
66 G H -1.7650
67 R H -1.6203
68 F H 0.0000
69 T H -0.8130
70 I H 0.0000
71 S H -0.6922
72 R H -1.3511
73 D H -1.5675
74 N H -2.2164
75 S H -1.6853
76 K H -2.3989
77 N H -1.9722
78 T H 0.0000
79 L H 0.0000
80 Y H -0.5913
81 L H 0.0000
82 Q H -1.3076
83 M H 0.0000
84 N H -1.5205
85 S H -1.2839
86 L H 0.0000
87 R H -2.3771
88 A H -1.8259
89 E H -2.2228
90 D H 0.0000
91 T H -1.1505
92 A H 0.0000
93 V H 0.0922
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 A H 0.0000
98 L H 0.0000
99 T H 0.0000
100 N H -0.9809
101 S H -0.8510
102 L H -0.1820
103 T H -0.1395
104 S H -0.0892
105 S H -0.0929
106 G H 0.0310
107 I H 0.8928
108 G H 0.2953
109 I H 0.0000
110 G H 0.0000
111 S H 0.0000
112 M H 0.0000
113 Y H 0.4307
114 G H 0.0655
115 W H -0.4498
116 G H 0.0000
117 Q H -1.3591
118 G H -0.5455
119 T H -0.2386
120 T H -0.5239
121 V H 0.0000
122 T H -1.5353
123 V H 0.0000
124 S H -1.6286
125 S H -1.1982
126 A H -0.6457
127 S H -0.6737
1 D L -2.1837
2 I L -1.2977
3 Q L -1.8500
4 M L 0.0000
5 T L -1.0698
6 Q L 0.0000
7 S L -0.3519
8 P L -0.1006
9 L L 0.2887
10 S L -0.1772
11 L L -0.3533
12 P L -1.1788
13 V L 0.0000
14 T L -2.1658
15 P L -2.4020
16 G L -2.1380
17 E L -2.7813
18 P L -2.3831
19 A L 0.0000
20 S L -0.7970
21 I L 0.0000
22 S L -0.9398
23 S L 0.0000
24 K L -1.9903
25 T L 0.0000
26 S L -1.0566
27 D L 0.0000
28 S L 0.1123
29 Y L 0.6330
30 G L -0.6753
31 N L -1.2349
32 S L -1.2373
33 Y L 0.0000
34 V L 0.0000
35 G L 0.0000
36 W L 0.0000
37 Y L 0.0000
38 L L -0.3761
39 Q L 0.0000
40 K L -1.4060
41 S L -0.9162
42 G L -1.4522
43 Q L -2.0812
44 S L -1.4510
45 P L 0.0000
46 Q L -1.1670
47 L L 0.0000
48 L L 0.0000
49 I L 0.0000
50 Y L -0.4049
51 R L -1.6356
52 A L -1.1179
53 S L -0.5962
54 I L -0.0663
55 R L -1.1273
56 A L -0.6189
57 G L -0.6439
58 G L -1.0010
59 V L -1.0945
60 P L -1.3734
61 D L -2.4216
62 R L -2.3037
63 F L 0.0000
64 S L -1.1978
65 G L 0.0000
66 S L -1.0700
67 G L -1.4766
68 S L -1.5823
69 G L -1.2347
70 T L -1.5496
71 D L -2.4886
72 F L 0.0000
73 T L -1.2002
74 L L 0.0000
75 K L -1.8786
76 I L 0.0000
77 S L -2.4802
78 R L -3.4825
79 V L 0.0000
80 E L -2.7728
81 A L -1.8813
82 E L -2.2855
83 D L 0.0000
84 V L -0.8687
85 G L 0.0000
86 F L 0.1678
87 Y L 0.0000
88 Y L 0.0000
89 V L 0.0000
90 V L 0.0000
91 D L 0.0000
92 T L 0.0000
93 K L -0.6780
94 T L -0.1973
95 Y L -0.0626
96 P L -0.6563
97 I L 0.0000
98 G L -0.9761
99 F L -0.6003
100 G L 0.0000
101 Q L -1.5549
102 G L 0.0000
103 T L 0.0000
104 K L -0.6604
105 L L 0.0000
106 E L -1.6345
107 I L -1.7304
108 K L -2.3315
109 R L -2.2372
110 T L -0.3828
111 V L 1.0864
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Laboratory of Theory of Biopolymers 2018