Project name: GGGHKGF4

Status: done

Started: 2026-02-23 05:55:21
Settings
Chain sequence(s) A: GGGHKGF
C: GGGHKGF
B: GGGHKGF
D: GGGHKGF
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:55)
Show buried residues

Minimal score value
-3.3446
Maximal score value
1.8123
Average score
-1.1892
Total score value
-33.2988

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.9155
2 G A -1.3703
3 G A -1.7144
4 H A -2.3581
5 K A -1.9136
6 G A 0.0000
7 F A 0.6493
1 G B -0.9192
2 G B -1.9086
3 G B -2.8391
4 H B -2.5486
5 K B -2.7076
6 G B -0.4329
7 F B 1.3267
1 G C -0.5098
2 G C 0.0000
3 G C -3.0667
4 H C -2.8383
5 K C -2.4458
6 G C 0.7703
7 F C 1.8123
1 G D 0.1732
2 G D -0.3378
3 G D -2.0838
4 H D -3.0123
5 K D -3.3446
6 G D -1.4981
7 F D 0.7345
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Laboratory of Theory of Biopolymers 2018