Project name: query_structure

Status: done

Started: 2026-03-17 00:14:58
Settings
Chain sequence(s) A: NAINMANALNMANMINALNMANMVNAINMANALNMANMINALNMANMV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:29)
Show buried residues

Minimal score value
-1.0769
Maximal score value
1.9976
Average score
0.1452
Total score value
6.9697

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -0.7882
2 A A 0.1964
3 I A 1.1594
4 N A -0.6349
5 M A 0.5670
6 A A 0.2229
7 N A -0.8314
8 A A 0.0628
9 L A 0.5644
10 N A -0.9875
11 M A 0.2985
12 A A -0.0016
13 N A -0.9821
14 M A 0.6348
15 I A 0.7803
16 N A -0.8857
17 A A 0.1336
18 L A 0.5820
19 N A -0.5951
20 M A 0.6175
21 A A 0.0763
22 N A -0.9194
23 M A 0.6978
24 V A 0.9640
25 N A -0.7441
26 A A 0.2368
27 I A 0.8506
28 N A -0.6501
29 M A 0.6219
30 A A 0.1426
31 N A -1.0769
32 A A 0.0567
33 L A 0.6257
34 N A -0.8879
35 M A 0.4063
36 A A 0.1016
37 N A -0.8675
38 M A 0.7560
39 I A 0.9919
40 N A -0.7426
41 A A 0.2843
42 L A 0.6980
43 N A -0.0420
44 M A 1.1043
45 A A 0.7589
46 N A -0.1006
47 M A 1.5164
48 V A 1.9976
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Laboratory of Theory of Biopolymers 2018