| Chain sequence(s) |
A: CGKNSSETSGDNWSKYQSNKSITIGFDSTFVPMGFAQKDGSYAGFDIDLATAVFEKYGITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDERREKVAFSNSYMKNEQVLVTKKSSGITTAKDMTGKTLGAQAGSSGYADFEANPEILKNIVANKEANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGARKEDTNLVKKINEAFSSLYKDGKFQEISQKWFGEDVATKEVKEGQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.0379 | |
| 2 | G | A | -0.8697 | |
| 3 | K | A | -1.5826 | |
| 4 | N | A | -2.1487 | |
| 5 | S | A | -1.8940 | |
| 6 | S | A | 0.0000 | |
| 7 | E | A | -2.7531 | |
| 8 | T | A | -2.0721 | |
| 9 | S | A | -1.5234 | |
| 10 | G | A | -1.7270 | |
| 11 | D | A | -2.1449 | |
| 12 | N | A | 0.0000 | |
| 13 | W | A | -0.9998 | |
| 14 | S | A | -1.1779 | |
| 15 | K | A | -1.7066 | |
| 16 | Y | A | 0.0000 | |
| 17 | Q | A | -1.9283 | |
| 18 | S | A | -1.7710 | |
| 19 | N | A | -2.5609 | |
| 20 | K | A | -2.7091 | |
| 21 | S | A | -1.7387 | |
| 22 | I | A | 0.0000 | |
| 23 | T | A | 0.0000 | |
| 24 | I | A | 0.0000 | |
| 25 | G | A | 0.0000 | |
| 26 | F | A | 0.0000 | |
| 27 | D | A | 0.0000 | |
| 28 | S | A | -0.0796 | |
| 29 | T | A | -0.1623 | |
| 30 | F | A | 0.0000 | |
| 31 | V | A | 0.3372 | |
| 32 | P | A | 0.0000 | |
| 33 | M | A | 0.0000 | |
| 34 | G | A | 0.0000 | |
| 35 | F | A | 0.0114 | |
| 36 | A | A | -0.8575 | |
| 37 | Q | A | -2.0835 | |
| 38 | K | A | -2.9822 | |
| 39 | D | A | -3.0152 | |
| 40 | G | A | -1.9930 | |
| 41 | S | A | -1.1389 | |
| 42 | Y | A | -0.2623 | |
| 43 | A | A | 0.0456 | |
| 44 | G | A | 0.0000 | |
| 45 | F | A | 0.0000 | |
| 46 | D | A | 0.0000 | |
| 47 | I | A | 0.0000 | |
| 48 | D | A | -0.4737 | |
| 49 | L | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | T | A | -0.6696 | |
| 52 | A | A | 0.0000 | |
| 53 | V | A | 0.0000 | |
| 54 | F | A | 0.0000 | |
| 55 | E | A | -2.2723 | |
| 56 | K | A | -1.7745 | |
| 57 | Y | A | -1.3987 | |
| 58 | G | A | -1.6286 | |
| 59 | I | A | 0.0000 | |
| 60 | T | A | -1.2639 | |
| 61 | V | A | -0.8009 | |
| 62 | N | A | -1.0152 | |
| 63 | W | A | -0.4501 | |
| 64 | Q | A | -0.7900 | |
| 65 | P | A | -0.4738 | |
| 66 | I | A | -0.4459 | |
| 67 | D | A | -1.2357 | |
| 68 | W | A | 0.0000 | |
| 69 | D | A | -1.0089 | |
| 70 | L | A | 0.1568 | |
| 71 | K | A | 0.0000 | |
| 72 | E | A | -0.6846 | |
| 73 | A | A | -0.7370 | |
| 74 | E | A | -0.9031 | |
| 75 | L | A | 0.0000 | |
| 76 | T | A | -1.6047 | |
| 77 | K | A | -2.2308 | |
| 78 | G | A | 0.0000 | |
| 79 | T | A | -1.2754 | |
| 80 | I | A | 0.0000 | |
| 81 | D | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | W | A | 0.0000 | |
| 85 | N | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | Y | A | 0.0000 | |
| 88 | S | A | 0.0000 | |
| 89 | A | A | -1.0109 | |
| 90 | T | A | -2.0900 | |
| 91 | D | A | -3.7456 | |
| 92 | E | A | -3.8436 | |
| 93 | R | A | 0.0000 | |
| 94 | R | A | -4.3132 | |
| 95 | E | A | -4.3411 | |
| 96 | K | A | -3.5134 | |
| 97 | V | A | 0.0000 | |
| 98 | A | A | -1.6634 | |
| 99 | F | A | -0.6176 | |
| 100 | S | A | 0.0000 | |
| 101 | N | A | -1.3569 | |
| 102 | S | A | -0.9390 | |
| 103 | Y | A | 0.0000 | |
| 104 | M | A | 0.0000 | |
| 105 | K | A | -2.0457 | |
| 106 | N | A | 0.0000 | |
| 107 | E | A | -1.4474 | |
| 108 | Q | A | 0.0000 | |
| 109 | V | A | 0.0000 | |
| 110 | L | A | 0.0000 | |
| 111 | V | A | 0.0000 | |
| 112 | T | A | 0.0000 | |
| 113 | K | A | -2.2694 | |
| 114 | K | A | -2.6209 | |
| 115 | S | A | -1.5234 | |
| 116 | S | A | -1.4345 | |
| 117 | G | A | -1.2887 | |
| 118 | I | A | 0.0000 | |
| 119 | T | A | -0.8201 | |
| 120 | T | A | -0.8474 | |
| 121 | A | A | -0.9068 | |
| 122 | K | A | -1.8665 | |
| 123 | D | A | -1.6669 | |
| 124 | M | A | 0.0000 | |
| 125 | T | A | -1.2792 | |
| 126 | G | A | -1.3585 | |
| 127 | K | A | -1.3541 | |
| 128 | T | A | -1.7348 | |
| 129 | L | A | 0.0000 | |
| 130 | G | A | 0.0000 | |
| 131 | A | A | 0.0000 | |
| 132 | Q | A | 0.0000 | |
| 133 | A | A | 0.0000 | |
| 134 | G | A | -0.7392 | |
| 135 | S | A | 0.0000 | |
| 136 | S | A | 0.0000 | |
| 137 | G | A | 0.0000 | |
| 138 | Y | A | -0.5172 | |
| 139 | A | A | -0.6409 | |
| 140 | D | A | -0.8698 | |
| 141 | F | A | 0.0000 | |
| 142 | E | A | -1.6516 | |
| 143 | A | A | -0.9197 | |
| 144 | N | A | -1.4887 | |
| 145 | P | A | -2.0584 | |
| 146 | E | A | -2.1305 | |
| 147 | I | A | -1.0464 | |
| 148 | L | A | 0.0000 | |
| 149 | K | A | -2.3160 | |
| 150 | N | A | -2.5624 | |
| 151 | I | A | -1.7041 | |
| 152 | V | A | 0.0000 | |
| 153 | A | A | -1.9486 | |
| 154 | N | A | -2.6871 | |
| 155 | K | A | -3.3504 | |
| 156 | E | A | -2.8923 | |
| 157 | A | A | 0.0000 | |
| 158 | N | A | -1.7793 | |
| 159 | Q | A | -2.0021 | |
| 160 | Y | A | -1.5861 | |
| 161 | Q | A | -1.9912 | |
| 162 | T | A | -1.3768 | |
| 163 | F | A | 0.0000 | |
| 164 | N | A | -0.7941 | |
| 165 | E | A | -1.4038 | |
| 166 | A | A | 0.0000 | |
| 167 | L | A | 0.0000 | |
| 168 | I | A | -0.3290 | |
| 169 | D | A | -1.9105 | |
| 170 | L | A | 0.0000 | |
| 171 | K | A | -2.8393 | |
| 172 | N | A | -3.1840 | |
| 173 | D | A | -3.7963 | |
| 174 | R | A | -3.4355 | |
| 175 | I | A | 0.0000 | |
| 176 | D | A | -2.0969 | |
| 177 | G | A | 0.0000 | |
| 178 | L | A | 0.0000 | |
| 179 | L | A | 0.0000 | |
| 180 | I | A | 0.0000 | |
| 181 | D | A | 0.0000 | |
| 182 | R | A | -1.3634 | |
| 183 | V | A | -0.5738 | |
| 184 | Y | A | 0.0000 | |
| 185 | A | A | 0.0000 | |
| 186 | N | A | -0.7175 | |
| 187 | Y | A | -0.5475 | |
| 188 | Y | A | -0.7682 | |
| 189 | L | A | 0.0000 | |
| 190 | E | A | -2.2800 | |
| 191 | A | A | -1.5425 | |
| 192 | E | A | -2.1948 | |
| 193 | G | A | -1.9342 | |
| 194 | V | A | -1.3928 | |
| 195 | L | A | -1.3196 | |
| 196 | N | A | -2.2182 | |
| 197 | D | A | -2.5996 | |
| 198 | Y | A | -1.7108 | |
| 199 | N | A | -0.9704 | |
| 200 | V | A | -0.1884 | |
| 201 | F | A | 0.1494 | |
| 202 | T | A | -0.4473 | |
| 203 | V | A | 0.0000 | |
| 204 | G | A | -0.7917 | |
| 205 | L | A | 0.0000 | |
| 206 | E | A | -2.1083 | |
| 207 | T | A | -1.5375 | |
| 208 | E | A | -1.2002 | |
| 209 | A | A | -1.0738 | |
| 210 | F | A | 0.0000 | |
| 211 | A | A | 0.0000 | |
| 212 | V | A | 0.0000 | |
| 213 | G | A | 0.0000 | |
| 214 | A | A | 0.0000 | |
| 215 | R | A | 0.0000 | |
| 216 | K | A | -2.8231 | |
| 217 | E | A | -2.2098 | |
| 218 | D | A | 0.0000 | |
| 219 | T | A | -1.6801 | |
| 220 | N | A | -1.7469 | |
| 221 | L | A | 0.0000 | |
| 222 | V | A | -1.6455 | |
| 223 | K | A | -2.7116 | |
| 224 | K | A | -2.3003 | |
| 225 | I | A | 0.0000 | |
| 226 | N | A | -2.0702 | |
| 227 | E | A | -2.3304 | |
| 228 | A | A | 0.0000 | |
| 229 | F | A | 0.0000 | |
| 230 | S | A | -2.1509 | |
| 231 | S | A | -1.8443 | |
| 232 | L | A | 0.0000 | |
| 233 | Y | A | -2.1594 | |
| 234 | K | A | -3.0705 | |
| 235 | D | A | -3.0619 | |
| 236 | G | A | -2.3547 | |
| 237 | K | A | -2.3183 | |
| 238 | F | A | 0.0000 | |
| 239 | Q | A | -2.8521 | |
| 240 | E | A | -3.5038 | |
| 241 | I | A | 0.0000 | |
| 242 | S | A | 0.0000 | |
| 243 | Q | A | -3.4206 | |
| 244 | K | A | -3.0407 | |
| 245 | W | A | -1.5004 | |
| 246 | F | A | -1.1298 | |
| 247 | G | A | -2.4021 | |
| 248 | E | A | -3.0472 | |
| 249 | D | A | -2.2614 | |
| 250 | V | A | -1.3063 | |
| 251 | A | A | 0.0000 | |
| 252 | T | A | 0.0000 | |
| 253 | K | A | -3.3460 | |
| 254 | E | A | -3.1319 | |
| 255 | V | A | 0.0000 | |
| 256 | K | A | -3.0715 | |
| 257 | E | A | -3.6565 | |
| 258 | G | A | -3.1645 | |
| 259 | Q | A | -2.7663 |