Project name: query_structure

Status: done

Started: 2026-03-16 23:52:41
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Chain sequence(s) A: LRKEPEIITVTLKKQNGMGLCIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGQSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLAT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:51)
Show buried residues

Minimal score value
-3.4978
Maximal score value
0.6267
Average score
-0.8793
Total score value
-88.8106

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.0133
2 R A -2.7120
3 K A -3.1361
4 E A -3.1286
5 P A -2.0731
6 E A -2.2613
7 I A -0.0618
8 I A 0.0979
9 T A -0.1047
10 V A 0.0000
11 T A -0.8628
12 L A 0.0000
13 K A -2.0148
14 K A -2.0204
15 Q A -2.3846
16 N A -2.2259
17 G A -1.4761
18 M A 0.0000
19 G A -0.2212
20 L A 0.2813
21 C A 0.4264
22 I A -0.2407
23 V A -0.2020
24 A A -0.8900
25 A A -0.7190
26 K A -2.1914
27 G A 0.0000
28 A A -0.8672
29 G A -1.5058
30 Q A -2.2225
31 D A -3.0131
32 K A -2.6699
33 L A -1.2293
34 G A 0.0000
35 I A 0.0000
36 Y A 0.0000
37 V A 0.0000
38 K A -1.1947
39 S A -0.4911
40 V A 0.1462
41 V A 0.2528
42 K A -1.2093
43 G A -0.7773
44 G A -0.7882
45 A A 0.0000
46 A A 0.0000
47 D A -0.5073
48 V A 0.4562
49 D A -0.8177
50 G A -0.9816
51 R A -1.5482
52 L A 0.0000
53 A A -0.7353
54 A A -0.6525
55 G A -0.5619
56 D A 0.0000
57 Q A 0.0000
58 L A 0.0000
59 L A 0.0279
60 S A -0.9566
61 V A 0.0000
62 D A -2.0543
63 G A -1.7867
64 Q A -1.6102
65 S A -0.7523
66 L A 0.0000
67 V A 0.2512
68 G A -1.0014
69 L A -0.8339
70 S A -1.6520
71 Q A -2.1267
72 E A -3.3778
73 R A -3.4978
74 A A 0.0000
75 A A -2.2888
76 E A -3.3998
77 L A -2.2345
78 M A 0.0000
79 T A -1.9334
80 R A -2.3161
81 T A -1.4450
82 S A -1.0181
83 S A -1.2467
84 V A -0.6901
85 V A 0.0000
86 T A -1.1147
87 L A 0.0000
88 E A -0.9703
89 V A 0.0000
90 A A 0.0000
91 K A -1.3097
92 Q A -1.2282
93 G A 0.0000
94 A A 0.0000
95 I A 0.6267
96 Y A -0.2066
97 H A -0.3632
98 G A -0.0582
99 L A 0.2331
100 A A 0.3826
101 T A 0.1663
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Laboratory of Theory of Biopolymers 2018