| Chain sequence(s) |
A: LRKEPEIITVTLKKQNGMGLCIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGQSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLAT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.0133 | |
| 2 | R | A | -2.7120 | |
| 3 | K | A | -3.1361 | |
| 4 | E | A | -3.1286 | |
| 5 | P | A | -2.0731 | |
| 6 | E | A | -2.2613 | |
| 7 | I | A | -0.0618 | |
| 8 | I | A | 0.0979 | |
| 9 | T | A | -0.1047 | |
| 10 | V | A | 0.0000 | |
| 11 | T | A | -0.8628 | |
| 12 | L | A | 0.0000 | |
| 13 | K | A | -2.0148 | |
| 14 | K | A | -2.0204 | |
| 15 | Q | A | -2.3846 | |
| 16 | N | A | -2.2259 | |
| 17 | G | A | -1.4761 | |
| 18 | M | A | 0.0000 | |
| 19 | G | A | -0.2212 | |
| 20 | L | A | 0.2813 | |
| 21 | C | A | 0.4264 | |
| 22 | I | A | -0.2407 | |
| 23 | V | A | -0.2020 | |
| 24 | A | A | -0.8900 | |
| 25 | A | A | -0.7190 | |
| 26 | K | A | -2.1914 | |
| 27 | G | A | 0.0000 | |
| 28 | A | A | -0.8672 | |
| 29 | G | A | -1.5058 | |
| 30 | Q | A | -2.2225 | |
| 31 | D | A | -3.0131 | |
| 32 | K | A | -2.6699 | |
| 33 | L | A | -1.2293 | |
| 34 | G | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | K | A | -1.1947 | |
| 39 | S | A | -0.4911 | |
| 40 | V | A | 0.1462 | |
| 41 | V | A | 0.2528 | |
| 42 | K | A | -1.2093 | |
| 43 | G | A | -0.7773 | |
| 44 | G | A | -0.7882 | |
| 45 | A | A | 0.0000 | |
| 46 | A | A | 0.0000 | |
| 47 | D | A | -0.5073 | |
| 48 | V | A | 0.4562 | |
| 49 | D | A | -0.8177 | |
| 50 | G | A | -0.9816 | |
| 51 | R | A | -1.5482 | |
| 52 | L | A | 0.0000 | |
| 53 | A | A | -0.7353 | |
| 54 | A | A | -0.6525 | |
| 55 | G | A | -0.5619 | |
| 56 | D | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | L | A | 0.0279 | |
| 60 | S | A | -0.9566 | |
| 61 | V | A | 0.0000 | |
| 62 | D | A | -2.0543 | |
| 63 | G | A | -1.7867 | |
| 64 | Q | A | -1.6102 | |
| 65 | S | A | -0.7523 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.2512 | |
| 68 | G | A | -1.0014 | |
| 69 | L | A | -0.8339 | |
| 70 | S | A | -1.6520 | |
| 71 | Q | A | -2.1267 | |
| 72 | E | A | -3.3778 | |
| 73 | R | A | -3.4978 | |
| 74 | A | A | 0.0000 | |
| 75 | A | A | -2.2888 | |
| 76 | E | A | -3.3998 | |
| 77 | L | A | -2.2345 | |
| 78 | M | A | 0.0000 | |
| 79 | T | A | -1.9334 | |
| 80 | R | A | -2.3161 | |
| 81 | T | A | -1.4450 | |
| 82 | S | A | -1.0181 | |
| 83 | S | A | -1.2467 | |
| 84 | V | A | -0.6901 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -1.1147 | |
| 87 | L | A | 0.0000 | |
| 88 | E | A | -0.9703 | |
| 89 | V | A | 0.0000 | |
| 90 | A | A | 0.0000 | |
| 91 | K | A | -1.3097 | |
| 92 | Q | A | -1.2282 | |
| 93 | G | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | I | A | 0.6267 | |
| 96 | Y | A | -0.2066 | |
| 97 | H | A | -0.3632 | |
| 98 | G | A | -0.0582 | |
| 99 | L | A | 0.2331 | |
| 100 | A | A | 0.3826 | |
| 101 | T | A | 0.1663 |