Project name: 294b84bddf5c720

Status: done

Started: 2026-06-26 09:21:45
Settings
Chain sequence(s) A: MSHHHHHHSGMSEEEKIMEVHEKVMPHMEAAVDSALANGGVPDIAHFKEILKILEDFIKENMKDKENFDMVLSTIWNVFGSMVYMVLDRAREAADDPELALRTVVNMLRRIAEVTIHAFGVLYKTLKDNFKDDPEFVEKYFEKIKELLIEELQFIIDELRKLLEPLEDAPEEARREIEELIRWLEEKIKELEEDPEGFLEKAAEAELEENS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:56)
Show buried residues

Minimal score value
-4.9622
Maximal score value
0.6751
Average score
-1.6816
Total score value
-354.8112

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5501
2 S A -0.6280
3 H A -1.7492
4 H A -2.3624
5 H A -2.7652
6 H A -2.7902
7 H A -2.5747
8 H A -2.1409
9 S A -1.2866
10 G A -1.2017
11 M A -1.1897
12 S A -1.5113
13 E A -2.3450
14 E A -2.9444
15 E A -2.8105
16 K A -2.0768
17 I A -1.6157
18 M A -1.7525
19 E A -2.6294
20 V A 0.0000
21 H A -2.0273
22 E A -2.7162
23 K A -2.5634
24 V A 0.0000
25 M A -1.2217
26 P A -1.2800
27 H A -1.7070
28 M A 0.0000
29 E A -1.7163
30 A A -1.3771
31 A A 0.0000
32 V A 0.0000
33 D A -2.2042
34 S A -1.3403
35 A A 0.0000
36 L A -0.4389
37 A A -0.6090
38 N A -1.2162
39 G A -0.5677
40 G A 0.0000
41 V A 0.1449
42 P A 0.0000
43 D A -1.7924
44 I A -1.7543
45 A A -1.4612
46 H A -1.7724
47 F A 0.0000
48 K A -3.0255
49 E A -2.9983
50 I A 0.0000
51 L A 0.0000
52 K A -3.0704
53 I A -2.1023
54 L A 0.0000
55 E A -2.4154
56 D A -3.2551
57 F A 0.0000
58 I A 0.0000
59 K A -3.4784
60 E A -3.5837
61 N A 0.0000
62 M A 0.0000
63 K A -3.8497
64 D A -3.7688
65 K A -3.3589
66 E A -3.4225
67 N A -2.7881
68 F A 0.0000
69 D A -2.0865
70 M A -1.3922
71 V A 0.0000
72 L A 0.0000
73 S A -0.7721
74 T A 0.0000
75 I A 0.0000
76 W A -0.2138
77 N A -0.7276
78 V A 0.0000
79 F A 0.0000
80 G A 0.1584
81 S A 0.2460
82 M A 0.0000
83 V A 0.0000
84 Y A 0.6751
85 M A -0.3160
86 V A 0.0000
87 L A 0.0000
88 D A -2.9667
89 R A -3.2802
90 A A -2.7921
91 R A -3.9154
92 E A -3.9733
93 A A -2.9255
94 A A -2.8335
95 D A -3.1773
96 D A -2.8149
97 P A -2.4822
98 E A -2.4105
99 L A -1.2838
100 A A 0.0000
101 L A 0.0000
102 R A -1.1225
103 T A 0.0000
104 V A 0.0000
105 V A 0.0000
106 N A -0.3293
107 M A 0.0000
108 L A 0.0000
109 R A -0.4628
110 R A 0.0000
111 I A 0.0000
112 A A 0.0000
113 E A -0.7321
114 V A 0.0000
115 T A 0.0000
116 I A 0.0000
117 H A 0.0000
118 A A 0.0000
119 F A 0.0000
120 G A 0.0000
121 V A 0.0000
122 L A 0.0000
123 Y A 0.0000
124 K A -2.5583
125 T A 0.0000
126 L A 0.0000
127 K A -3.6191
128 D A -3.6175
129 N A -3.8790
130 F A 0.0000
131 K A -4.1238
132 D A -3.6570
133 D A -3.0592
134 P A -3.1425
135 E A -3.5055
136 F A -2.8058
137 V A 0.0000
138 E A -4.0383
139 K A -3.7625
140 Y A 0.0000
141 F A 0.0000
142 E A -3.8679
143 K A -3.0787
144 I A 0.0000
145 K A -2.6018
146 E A -3.1978
147 L A -1.7744
148 L A 0.0000
149 I A -1.9573
150 E A -2.1472
151 E A 0.0000
152 L A 0.0000
153 Q A -1.3652
154 F A -0.9657
155 I A 0.0000
156 I A 0.0000
157 D A -2.1708
158 E A -1.6454
159 L A 0.0000
160 R A -3.5967
161 K A -3.3570
162 L A -1.9066
163 L A -2.7429
164 E A -3.1307
165 P A -2.2685
166 L A -2.3112
167 E A -3.2745
168 D A -2.9429
169 A A -2.4137
170 P A -2.7028
171 E A -3.8652
172 E A -3.9934
173 A A 0.0000
174 R A -3.7909
175 R A -4.4388
176 E A -3.7706
177 I A 0.0000
178 E A -4.1233
179 E A -3.9221
180 L A 0.0000
181 I A 0.0000
182 R A -3.5393
183 W A -2.5085
184 L A 0.0000
185 E A -3.2667
186 E A -4.0307
187 K A -3.2512
188 I A -3.3772
189 K A -4.7853
190 E A -4.9622
191 L A 0.0000
192 E A -4.9126
193 E A -4.7495
194 D A -4.2199
195 P A -3.9024
196 E A -3.1427
197 G A -2.6256
198 F A 0.0000
199 L A 0.0000
200 E A -3.3232
201 K A -3.2842
202 A A 0.0000
203 A A -2.2769
204 E A -3.1918
205 A A -2.6373
206 E A -3.1384
207 L A 0.0000
208 E A -3.7651
209 E A -3.5787
210 N A -2.7917
211 S A -1.9649
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Laboratory of Theory of Biopolymers 2018