| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | FL20A,FL19A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.539808 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:00:22)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:33)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.7207 | |
| 2 | A | A | -2.4196 | |
| 3 | E | A | -2.5524 | |
| 4 | F | A | -0.9683 | |
| 5 | R | A | -2.7362 | |
| 6 | H | A | -3.0400 | |
| 7 | D | A | -2.5851 | |
| 8 | S | A | -1.3294 | |
| 9 | G | A | -0.5965 | |
| 10 | Y | A | -0.1685 | |
| 11 | E | A | -0.9226 | |
| 12 | V | A | 0.5801 | |
| 13 | H | A | -1.0233 | |
| 14 | H | A | -1.0415 | |
| 15 | Q | A | -0.2826 | |
| 16 | K | A | -0.9334 | |
| 17 | L | A | 0.4864 | |
| 18 | V | A | 0.3599 | |
| 19 | L | A | 1.4040 | mutated: FL19A |
| 20 | L | A | 1.5502 | mutated: FL20A |
| 21 | A | A | 0.3559 | |
| 22 | E | A | -1.0331 | |
| 23 | D | A | -1.4446 | |
| 24 | V | A | -0.5013 | |
| 25 | G | A | -1.3371 | |
| 26 | S | A | -1.5147 | |
| 27 | N | A | -2.0125 | |
| 28 | K | A | -1.7892 | |
| 29 | G | A | -0.2551 | |
| 30 | A | A | 0.2925 | |
| 31 | I | A | 2.3490 | |
| 32 | I | A | 3.2138 | |
| 33 | G | A | 2.3467 | |
| 34 | L | A | 3.0683 | |
| 35 | M | A | 3.4458 | |
| 36 | V | A | 2.9580 | |
| 37 | G | A | 1.9947 | |
| 38 | G | A | 1.8610 | |
| 39 | V | A | 3.0341 | |
| 40 | V | A | 3.8544 | |
| 41 | I | A | 3.4867 | |
| 42 | A | A | 1.8350 |