| Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMGWFRQAPGQGLEAVAISSGGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAESGYGYGDYGGYNYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.5474 | |
| 2 | V | A | -0.9886 | |
| 3 | Q | A | -1.1047 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.1190 | |
| 6 | E | A | 0.3330 | |
| 7 | S | A | -0.2519 | |
| 8 | G | A | -0.9428 | |
| 9 | G | A | -0.0184 | |
| 10 | G | A | 0.6585 | |
| 11 | L | A | 1.4332 | |
| 12 | V | A | -0.0722 | |
| 13 | Q | A | -1.4499 | |
| 14 | P | A | -1.8442 | |
| 15 | G | A | -1.5762 | |
| 16 | G | A | -1.0591 | |
| 17 | S | A | -1.1761 | |
| 18 | L | A | -0.9272 | |
| 19 | R | A | -2.1850 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4792 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1519 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.9398 | |
| 26 | G | A | -1.0595 | |
| 27 | F | A | -0.4416 | |
| 28 | T | A | -0.3743 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.0390 | |
| 31 | S | A | -0.3342 | |
| 32 | Y | A | 0.0000 | |
| 33 | A | A | -0.1855 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.4312 | |
| 40 | A | A | -0.8488 | |
| 41 | P | A | -0.9596 | |
| 42 | G | A | -1.2228 | |
| 43 | Q | A | -1.6896 | |
| 44 | G | A | -0.9211 | |
| 45 | L | A | 0.2134 | |
| 46 | E | A | -0.4734 | |
| 47 | A | A | 0.0139 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | S | A | -0.6206 | |
| 53 | G | A | -0.9425 | |
| 54 | G | A | -0.9792 | |
| 55 | G | A | -0.9969 | |
| 56 | S | A | -0.5245 | |
| 57 | T | A | 0.0038 | |
| 58 | Y | A | 0.3490 | |
| 59 | Y | A | -0.4554 | |
| 60 | A | A | 0.0000 | |
| 61 | D | A | -2.4019 | |
| 62 | S | A | -1.7933 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.5195 | |
| 65 | G | A | -1.7545 | |
| 66 | R | A | -1.5394 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.7639 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6279 | |
| 71 | R | A | -1.4110 | |
| 72 | D | A | -2.0522 | |
| 73 | N | A | -2.5460 | |
| 74 | S | A | -2.0029 | |
| 75 | K | A | -2.6482 | |
| 76 | N | A | -2.0504 | |
| 77 | T | A | -1.2277 | |
| 78 | L | A | 0.0000 | |
| 79 | Y | A | -0.6765 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2658 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.5475 | |
| 84 | S | A | -1.4623 | |
| 85 | L | A | 0.0000 | |
| 86 | R | A | -2.9360 | |
| 87 | A | A | -2.0230 | |
| 88 | E | A | -2.4676 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.4878 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | 0.9880 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | 0.4983 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | E | A | -0.3741 | |
| 99 | S | A | -0.5082 | |
| 100 | G | A | 0.1171 | |
| 101 | Y | A | 1.1171 | |
| 102 | G | A | 0.4268 | |
| 103 | Y | A | 0.7168 | |
| 104 | G | A | -0.5150 | |
| 105 | D | A | -1.2936 | |
| 106 | Y | A | 0.1532 | |
| 107 | G | A | -0.7543 | |
| 108 | G | A | -0.7643 | |
| 109 | Y | A | -0.3944 | |
| 110 | N | A | -1.1277 | |
| 111 | Y | A | -0.1915 | |
| 112 | W | A | 0.1829 | |
| 113 | G | A | 0.0178 | |
| 114 | Q | A | -0.8227 | |
| 115 | G | A | 0.1397 | |
| 116 | T | A | 0.6280 | |
| 117 | L | A | 1.7497 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | 0.3518 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.7457 | |
| 122 | S | A | -0.4948 |