Project name: EAK16-II_12

Status: done

Started: 2026-06-24 07:26:29
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Chain sequence(s) A: AEAEAKAKAEAEAKAK
C: AEAEAKAKAEAEAKAK
B: AEAEAKAKAEAEAKAK
E: AEAEAKAKAEAEAKAK
D: AEAEAKAKAEAEAKAK
G: AEAEAKAKAEAEAKAK
F: AEAEAKAKAEAEAKAK
I: AEAEAKAKAEAEAKAK
H: AEAEAKAKAEAEAKAK
K: KAEAEAKAK
J: AEAEAKAKAEAEAKAK
L: KAEAEAKAK
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:21:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:21:55)
Show buried residues

Minimal score value
-3.7955
Maximal score value
0.0
Average score
-2.5963
Total score value
-462.1416

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -2.0388
2 E A -2.4939
3 A A -1.9965
4 E A -2.5358
5 A A -2.4276
6 K A -3.2531
7 A A -2.6862
8 K A -3.1248
9 A A -2.8226
10 E A -3.7955
11 A A -3.1517
12 E A -3.7802
13 A A -3.0395
14 K A -3.4334
15 A A -2.5910
16 K A -2.9215
1 A B 0.0000
2 E B 0.0000
3 A B -1.0968
4 E B -1.4410
5 A B -1.4444
6 K B -2.0833
7 A B -1.9942
8 K B -2.6370
9 A B -2.0572
10 E B -3.2410
11 A B -2.9555
12 E B -2.9501
13 A B -2.5968
14 K B -3.3358
15 A B -2.2846
16 K B -2.6903
1 A C -1.3114
2 E C -2.3213
3 A C -1.7821
4 E C -2.1076
5 A C -1.8638
6 K C -2.3558
7 A C -1.7154
8 K C -2.0545
9 A C -2.5298
10 E C -2.3922
11 A C -2.3187
12 E C -2.8843
13 A C -3.0081
14 K C -3.2271
15 A C 0.0000
16 K C -3.4343
1 A D -1.6974
2 E D -2.9861
3 A D -2.7531
4 E D -3.3370
5 A D -2.9414
6 K D -3.4669
7 A D -2.9198
8 K D -3.6062
9 A D -2.5677
10 E D -2.8012
11 A D -2.5804
12 E D -3.4300
13 A D -2.5308
14 K D -3.0589
15 A D -2.3152
16 K D -2.7337
1 A E -2.4937
2 E E -2.2273
3 A E -1.9383
4 E E -2.6476
5 A E -2.1490
6 K E -2.8815
7 A E -2.8593
8 K E -3.3513
9 A E -2.9174
10 E E -3.6233
11 A E -3.3466
12 E E -3.7040
13 A E -2.9824
14 K E -3.1952
15 A E -2.4498
16 K E -2.6134
1 A F -1.6259
2 E F -2.0707
3 A F -1.3765
4 E F -2.2108
5 A F -2.2882
6 K F -2.1783
7 A F -1.7758
8 K F -2.3214
9 A F -2.3276
10 E F -2.3269
11 A F -2.1482
12 E F -2.4139
13 A F -2.2295
14 K F -2.8240
15 A F -2.0575
16 K F -2.4201
1 A G -1.1220
2 E G -2.1085
3 A G -2.4777
4 E G -2.6184
5 A G -1.9361
6 K G -2.1215
7 A G -2.3963
8 K G -2.7851
9 A G -1.9852
10 E G -2.1505
11 A G -2.1111
12 E G -2.9975
13 A G -2.6320
14 K G -2.5353
15 A G -2.0138
16 K G -2.5255
1 A H -1.8247
2 E H -2.7498
3 A H -2.6581
4 E H -2.8047
5 A H -2.7094
6 K H -3.4379
7 A H -3.3839
8 K H -3.7585
9 A H -3.1572
10 E H -3.7623
11 A H -3.4677
12 E H -3.7696
13 A H -2.9925
14 K H -3.3073
15 A H -2.5637
16 K H -2.6543
1 A I -1.7963
2 E I -2.4932
3 A I -2.2014
4 E I -3.2914
5 A I -2.6529
6 K I -2.7759
7 A I 0.0000
8 K I -3.0139
9 A I -2.2784
10 E I -2.3524
11 A I -2.8848
12 E I -2.8018
13 A I -2.2136
14 K I -2.8419
15 A I -2.1237
16 K I -2.5254
1 A J -1.7089
2 E J -2.8178
3 A J -2.4714
4 E J -2.6783
5 A J -2.2243
6 K J -3.0185
7 A J -2.6216
8 K J -3.1995
9 A J -2.7449
10 E J -3.2245
11 A J -2.7324
12 E J -3.4265
13 A J -2.9787
14 K J -3.5560
15 A J -2.3809
16 K J -2.7689
1 K K -3.5838
2 A K -2.4085
3 E K -3.1384
4 A K -3.4673
5 E K -3.7347
6 A K -2.7412
7 K K -3.4107
8 A K -2.5623
9 K K -2.6817
1 K L -2.8948
2 A L -2.9375
3 E L -3.4713
4 A L -2.6964
5 E L -3.4611
6 A L -2.7577
7 K L -2.9899
8 A L -2.4831
9 K L -2.4953
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Laboratory of Theory of Biopolymers 2018