| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGSIGHPLFNKFGDTENPTAPQHCGPDDRVPFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPEGHPLPDAPPPSPLYVRPPPSSPFAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPIPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9495 | |
| 2 | L | A | 1.9733 | |
| 3 | P | A | 0.6489 | |
| 4 | P | A | 0.3715 | |
| 5 | T | A | 0.1121 | |
| 6 | T | A | 0.1186 | |
| 7 | P | A | 0.1655 | |
| 8 | V | A | 1.2120 | |
| 9 | A | A | 0.0399 | |
| 10 | K | A | -1.1429 | |
| 11 | V | A | -0.3957 | |
| 12 | Q | A | -1.5061 | |
| 13 | S | A | -1.6078 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4518 | |
| 16 | E | A | -2.4519 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4571 | |
| 20 | P | A | 0.1023 | |
| 21 | T | A | 0.1142 | |
| 22 | S | A | -0.1740 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1193 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1439 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6661 | |
| 31 | R | A | -2.5691 | |
| 32 | L | A | -0.7266 | |
| 33 | L | A | 1.2505 | |
| 34 | T | A | 1.4777 | |
| 35 | V | A | 2.0228 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2206 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6221 | |
| 40 | K | A | -1.6353 | |
| 41 | D | A | -0.9208 | |
| 42 | I | A | 0.8364 | |
| 43 | V | A | 1.0254 | |
| 44 | K | A | -1.1902 | |
| 45 | N | A | -1.9302 | |
| 46 | G | A | -1.2355 | |
| 47 | K | A | -0.9425 | |
| 48 | V | A | 1.5039 | |
| 49 | V | A | 2.0672 | |
| 50 | V | A | 1.3022 | |
| 51 | P | A | 0.4937 | |
| 52 | K | A | -0.6141 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1319 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4673 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2908 | |
| 70 | K | A | -1.8057 | |
| 71 | F | A | -0.6588 | |
| 72 | A | A | -0.5810 | |
| 73 | L | A | -0.8730 | |
| 74 | P | A | -1.2676 | |
| 75 | Q | A | -2.4742 | |
| 76 | K | A | -3.0920 | |
| 77 | D | A | -2.9854 | |
| 78 | F | A | -1.6340 | |
| 79 | Y | A | -1.9119 | |
| 80 | D | A | -2.7606 | |
| 81 | P | A | -2.3580 | |
| 82 | E | A | -3.0785 | |
| 83 | K | A | -3.4462 | |
| 84 | E | A | -2.5025 | |
| 85 | R | A | -1.3145 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6743 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9779 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3578 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6541 | |
| 99 | G | A | -0.5182 | |
| 100 | P | A | -0.4822 | |
| 101 | L | A | -0.1267 | |
| 102 | G | A | -0.7122 | |
| 103 | R | A | -1.7007 | |
| 104 | G | A | -1.0722 | |
| 105 | S | A | -0.7969 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.0598 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2381 | |
| 110 | L | A | 0.1024 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2025 | |
| 113 | K | A | -0.4778 | |
| 114 | F | A | -1.0062 | |
| 115 | G | A | -1.0506 | |
| 116 | D | A | -1.5688 | |
| 117 | T | A | -1.3122 | |
| 118 | E | A | -2.7185 | |
| 119 | N | A | -2.4348 | |
| 120 | P | A | -1.8198 | |
| 121 | T | A | -1.0412 | |
| 122 | A | A | -0.4663 | |
| 123 | P | A | -0.4974 | |
| 124 | Q | A | -1.2900 | |
| 125 | H | A | -1.1858 | |
| 126 | C | A | -1.0554 | |
| 127 | G | A | -1.3995 | |
| 128 | P | A | -1.4957 | |
| 129 | D | A | -2.2746 | |
| 130 | D | A | -1.8312 | |
| 131 | R | A | -1.2994 | |
| 132 | V | A | -0.0985 | |
| 133 | P | A | 0.0488 | |
| 134 | F | A | 0.0618 | |
| 135 | S | A | -0.1890 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.9318 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5516 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2453 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1432 | |
| 157 | D | A | 0.3258 | |
| 158 | L | A | 0.8087 | |
| 159 | A | A | 0.1734 | |
| 160 | E | A | -1.4454 | |
| 161 | P | A | -0.2086 | |
| 162 | C | A | 0.1895 | |
| 163 | P | A | -0.1650 | |
| 164 | G | A | -0.0702 | |
| 165 | L | A | 0.5988 | |
| 166 | P | A | -0.1066 | |
| 167 | P | A | -0.3374 | |
| 168 | G | A | -0.4188 | |
| 169 | A | A | -0.0210 | |
| 170 | C | A | 0.6682 | |
| 171 | P | A | 0.5322 | |
| 172 | P | A | 0.7809 | |
| 173 | I | A | 1.9824 | |
| 174 | Q | A | 0.8496 | |
| 175 | L | A | 1.4994 | |
| 176 | V | A | 0.8434 | |
| 177 | N | A | -0.3455 | |
| 178 | S | A | 0.0104 | |
| 179 | V | A | 0.4040 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3733 | |
| 182 | D | A | 0.0844 | |
| 183 | G | A | -0.1586 | |
| 184 | D | A | -0.5654 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1622 | |
| 190 | F | A | 0.0636 | |
| 191 | G | A | -0.1058 | |
| 192 | N | A | -0.2772 | |
| 193 | M | A | -0.1516 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4258 | |
| 197 | E | A | -2.6097 | |
| 198 | L | A | -1.2295 | |
| 199 | Q | A | -2.5509 | |
| 200 | Q | A | -3.3549 | |
| 201 | D | A | -3.6129 | |
| 202 | R | A | -3.3564 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1933 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4006 | |
| 211 | S | A | -1.9124 | |
| 212 | T | A | -1.4838 | |
| 213 | R | A | -2.1644 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1833 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2887 | |
| 220 | L | A | 0.4980 | |
| 221 | K | A | -1.3151 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9744 | |
| 224 | N | A | -1.5832 | |
| 225 | E | A | -1.3367 | |
| 226 | A | A | -0.6797 | |
| 227 | Y | A | -0.4584 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7082 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1514 | |
| 234 | F | A | 0.0207 | |
| 235 | G | A | -0.9311 | |
| 236 | R | A | -2.7001 | |
| 237 | R | A | -2.9847 | |
| 238 | E | A | -2.1449 | |
| 239 | Q | A | -0.0981 | |
| 240 | V | A | 1.5593 | |
| 241 | Y | A | 1.2398 | |
| 242 | A | A | 0.1553 | |
| 243 | R | A | -1.3656 | |
| 244 | H | A | -1.2036 | |
| 245 | F | A | -0.2129 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7117 | |
| 249 | C | A | -0.9640 | |
| 250 | G | A | -1.0234 | |
| 251 | P | A | -0.9372 | |
| 252 | E | A | -1.3998 | |
| 253 | G | A | -1.3017 | |
| 254 | H | A | -1.4678 | |
| 255 | P | A | -1.3458 | |
| 256 | L | A | -0.3139 | |
| 257 | P | A | -0.8278 | |
| 258 | D | A | -1.9512 | |
| 259 | A | A | -0.8650 | |
| 260 | P | A | -0.9980 | |
| 261 | P | A | -0.7112 | |
| 262 | P | A | -0.1638 | |
| 263 | S | A | 0.0016 | |
| 264 | P | A | 0.7014 | |
| 265 | L | A | 1.5671 | |
| 266 | Y | A | 1.1690 | |
| 267 | V | A | 1.0829 | |
| 268 | R | A | -1.0035 | |
| 269 | P | A | -0.2720 | |
| 270 | P | A | -0.5270 | |
| 271 | P | A | -0.3233 | |
| 272 | S | A | -0.2606 | |
| 273 | S | A | 0.1740 | |
| 274 | P | A | 0.3528 | |
| 275 | F | A | 1.1193 | |
| 276 | A | A | 0.8088 | |
| 277 | V | A | 1.4715 | |
| 278 | R | A | 0.1666 | |
| 279 | P | A | -0.4534 | |
| 280 | P | A | -0.6243 | |
| 281 | T | A | -0.6012 | |
| 282 | D | A | -1.1241 | |
| 283 | Y | A | 0.7889 | |
| 284 | F | A | 0.6752 | |
| 285 | G | A | 0.1455 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8454 | |
| 291 | L | A | 1.5005 | |
| 292 | V | A | 0.4428 | |
| 293 | S | A | -0.1681 | |
| 294 | S | A | -0.9921 | |
| 295 | D | A | -1.8797 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0572 | |
| 298 | L | A | -1.2018 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6655 | |
| 301 | R | A | -1.9267 | |
| 302 | P | A | -0.9809 | |
| 303 | F | A | -0.1903 | |
| 304 | W | A | -0.5214 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0872 | |
| 307 | R | A | -2.9343 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6604 | |
| 310 | G | A | -1.4387 | |
| 311 | N | A | -1.4135 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9348 | |
| 319 | N | A | -0.8917 | |
| 320 | E | A | -1.0534 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.5723 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.5253 | |
| 333 | N | A | 0.2246 | |
| 334 | F | A | 1.4434 | |
| 335 | T | A | 0.7312 | |
| 336 | I | A | 0.3894 | |
| 337 | S | A | -0.9310 | |
| 338 | Q | A | -1.6095 | |
| 339 | Q | A | -0.7076 | |
| 340 | L | A | 0.9696 | |
| 341 | C | A | 0.9168 | |
| 342 | T | A | 0.7378 | |
| 343 | P | A | 0.6579 | |
| 344 | I | A | 2.0461 | |
| 345 | P | A | 0.9231 | |
| 346 | N | A | 0.2207 | |
| 347 | V | A | 1.8418 | |
| 348 | Y | A | 1.7261 | |
| 349 | D | A | 0.3121 | |
| 350 | P | A | -0.3744 | |
| 351 | S | A | -0.3132 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.4932 | |
| 354 | K | A | -1.7874 | |
| 355 | N | A | -1.7556 | |
| 356 | Y | A | -0.1138 | |
| 357 | L | A | 0.5641 | |
| 358 | R | A | 0.9056 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4832 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0145 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8732 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6592 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2991 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3305 | |
| 376 | L | A | -1.7670 | |
| 377 | D | A | -2.0484 | |
| 378 | P | A | -1.0694 | |
| 379 | G | A | -1.0247 | |
| 380 | V | A | -0.9353 | |
| 381 | L | A | -0.5484 | |
| 382 | A | A | -0.6666 | |
| 383 | H | A | -0.8489 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4041 | |
| 386 | T | A | -0.5758 | |
| 387 | M | A | -0.3312 | |
| 388 | N | A | -0.8714 | |
| 389 | P | A | -1.2851 | |
| 390 | T | A | -1.6041 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5901 | |
| 393 | E | A | -3.0344 | |
| 394 | N | A | -2.8058 | |
| 395 | W | A | -1.6124 | |
| 396 | N | A | -1.5086 | |
| 397 | L | A | -0.3308 | |
| 398 | G | A | 0.4711 | |
| 399 | F | A | 2.4033 | |
| 400 | V | A | 1.8373 | |
| 401 | P | A | 0.0408 | |
| 402 | P | A | -1.9402 | |
| 403 | K | A | -3.6233 | |
| 404 | E | A | -4.0234 | |
| 405 | R | A | -4.4792 | |
| 406 | E | A | -4.0209 | |
| 407 | D | A | -2.9726 | |
| 408 | P | A | -1.8227 | |
| 409 | Y | A | -0.9841 | |
| 410 | K | A | -2.1005 | |
| 411 | G | A | -0.6286 | |
| 412 | L | A | 0.6710 | |
| 413 | I | A | 1.5857 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3865 | |
| 416 | E | A | -1.6484 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8389 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8844 | |
| 421 | E | A | -2.4867 | |
| 422 | R | A | -2.0357 | |
| 423 | F | A | -1.0095 | |
| 424 | S | A | -1.3133 | |
| 425 | Q | A | -1.8417 | |
| 426 | D | A | -2.8946 | |
| 427 | L | A | -2.0062 | |
| 428 | D | A | -2.7984 | |
| 429 | Q | A | -2.6211 | |
| 430 | F | A | -1.4595 | |
| 431 | A | A | -0.8927 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6255 | |
| 435 | K | A | -0.7595 | |
| 436 | F | A | 0.1351 | |
| 437 | L | A | 1.0183 | |
| 438 | Y | A | 0.8133 | |
| 439 | Q | A | -0.2742 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine