| Chain sequence(s) |
A: CDQHGVVYITENKNKTVC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.8157 | |
| 2 | D | A | 0.0000 | |
| 3 | Q | A | -0.9414 | |
| 4 | H | A | -1.0271 | |
| 5 | G | A | -0.1551 | |
| 6 | V | A | 1.6988 | |
| 7 | V | A | 2.3715 | |
| 8 | Y | A | 2.7298 | |
| 9 | I | A | 1.3741 | |
| 10 | T | A | -0.9552 | |
| 11 | E | A | -2.8550 | |
| 12 | N | A | -3.2446 | |
| 13 | K | A | -3.3497 | |
| 14 | N | A | -2.5632 | |
| 15 | K | A | -1.3202 | |
| 16 | T | A | 0.0000 | |
| 17 | V | A | 2.1038 | |
| 18 | C | A | 1.9367 |