Project name: EP078_agg

Status: done

Started: 2026-07-26 04:00:16
Settings
Chain sequence(s) A: CDQHGVVYITENKNKTVC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:05)
Show buried residues

Minimal score value
-3.3497
Maximal score value
2.7298
Average score
-0.1878
Total score value
-3.3811

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.8157
2 D A 0.0000
3 Q A -0.9414
4 H A -1.0271
5 G A -0.1551
6 V A 1.6988
7 V A 2.3715
8 Y A 2.7298
9 I A 1.3741
10 T A -0.9552
11 E A -2.8550
12 N A -3.2446
13 K A -3.3497
14 N A -2.5632
15 K A -1.3202
16 T A 0.0000
17 V A 2.1038
18 C A 1.9367
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Laboratory of Theory of Biopolymers 2018