| Chain sequence(s) |
A: FEVLLP
C: FEVLLP B: FEVLLP E: FEVLLP D: FEVLLP G: FEVLLP F: FEVLLP I: FEVLLP H: FEVLLP J: FEVLLP input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | C | 1.6476 | |
| 2 | E | C | 0.8377 | |
| 3 | V | C | 0.0000 | |
| 4 | L | C | 1.1305 | |
| 5 | L | C | 0.0000 | |
| 6 | P | C | 0.8391 | |
| 1 | F | D | 2.2389 | |
| 2 | E | D | 0.0000 | |
| 3 | V | D | 1.2188 | |
| 4 | L | D | 0.0000 | |
| 5 | L | D | 1.0428 | |
| 6 | P | D | 0.6778 | |
| 1 | F | B | 1.5132 | |
| 2 | E | B | -0.2436 | |
| 3 | V | B | 0.0000 | |
| 4 | L | B | 1.8733 | |
| 5 | L | B | 1.4227 | |
| 6 | P | B | 1.0058 | |
| 1 | F | A | 1.6502 | |
| 2 | E | A | 0.3476 | |
| 3 | V | A | 0.8566 | |
| 4 | L | A | 1.5641 | |
| 5 | L | A | 2.0474 | |
| 6 | P | A | 1.0534 | |
| 1 | F | F | 1.4203 | |
| 2 | E | F | -0.1246 | |
| 3 | V | F | 0.0000 | |
| 4 | L | F | 1.5644 | |
| 5 | L | F | 0.0000 | |
| 6 | P | F | 1.2006 | |
| 1 | F | E | 1.8280 | |
| 2 | E | E | 0.0000 | |
| 3 | V | E | 0.7784 | |
| 4 | L | E | 0.0000 | |
| 5 | L | E | 0.9165 | |
| 6 | P | E | 0.4950 | |
| 1 | F | H | 2.1195 | |
| 2 | E | H | 0.0000 | |
| 3 | V | H | 1.0653 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.8862 | |
| 6 | P | H | 0.6686 | |
| 1 | F | G | 1.1505 | |
| 2 | E | G | 0.4829 | |
| 3 | V | G | 0.0000 | |
| 4 | L | G | 1.9086 | |
| 5 | L | G | 0.0000 | |
| 6 | P | G | 1.3200 | |
| 1 | F | J | 1.5061 | |
| 2 | E | J | -0.2088 | |
| 3 | V | J | 1.1299 | |
| 4 | L | J | 1.5591 | |
| 5 | L | J | 1.5427 | |
| 6 | P | J | 0.7035 | |
| 1 | F | I | 2.4192 | |
| 2 | E | I | 1.8392 | |
| 3 | V | I | 2.5942 | |
| 4 | L | I | 2.2597 | |
| 5 | L | I | 2.0432 | |
| 6 | P | I | 0.6625 |