Project name: CM254-286 FEVLLP

Status: done

Started: 2026-03-07 15:16:42
Settings
Chain sequence(s) A: FEVLLP
C: FEVLLP
B: FEVLLP
E: FEVLLP
D: FEVLLP
G: FEVLLP
F: FEVLLP
I: FEVLLP
H: FEVLLP
J: FEVLLP
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,J
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:22)
Show buried residues

Minimal score value
-0.2436
Maximal score value
2.5942
Average score
0.9742
Total score value
58.4546

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F C 1.6476
2 E C 0.8377
3 V C 0.0000
4 L C 1.1305
5 L C 0.0000
6 P C 0.8391
1 F D 2.2389
2 E D 0.0000
3 V D 1.2188
4 L D 0.0000
5 L D 1.0428
6 P D 0.6778
1 F B 1.5132
2 E B -0.2436
3 V B 0.0000
4 L B 1.8733
5 L B 1.4227
6 P B 1.0058
1 F A 1.6502
2 E A 0.3476
3 V A 0.8566
4 L A 1.5641
5 L A 2.0474
6 P A 1.0534
1 F F 1.4203
2 E F -0.1246
3 V F 0.0000
4 L F 1.5644
5 L F 0.0000
6 P F 1.2006
1 F E 1.8280
2 E E 0.0000
3 V E 0.7784
4 L E 0.0000
5 L E 0.9165
6 P E 0.4950
1 F H 2.1195
2 E H 0.0000
3 V H 1.0653
4 L H 0.0000
5 L H 0.8862
6 P H 0.6686
1 F G 1.1505
2 E G 0.4829
3 V G 0.0000
4 L G 1.9086
5 L G 0.0000
6 P G 1.3200
1 F J 1.5061
2 E J -0.2088
3 V J 1.1299
4 L J 1.5591
5 L J 1.5427
6 P J 0.7035
1 F I 2.4192
2 E I 1.8392
3 V I 2.5942
4 L I 2.2597
5 L I 2.0432
6 P I 0.6625
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Laboratory of Theory of Biopolymers 2018