| Chain sequence(s) |
A: GPALLNPEPEVRSTDEFVTPTDLLYIAETDLLTETGNPTKDIVVNGKVVVPKVSAYQWLVFKLTLPDPNKLPLPSADFLDPSTEIRIWRLLAFHIGVGGPLGKGSYGHKNFNALGDVSNPTTPVHGTADDRKALSYTPIRKQLYIIGNRPPTGKYTAPAAPSPGLPPGAEPPTETVHDTIEHGDMADIGFGAKDYAALLPEKDDVPDIILDTKTKVPDIEGMKAEPYGDRMFTYDEKTSSKDVKKLVRDGPDLHPLPDSPPPSPLYTKPPPDSPYAIRPPTDYFTIPDAGEITKEDEIFNKPVFLEKTAGKNNGILWGNRLYITILDNSRAEIETITTRVATPEPDVYDPSYYVTSKRYTREYKISLIVQLCIIPLTPETRAYLERLDPSILVDAELPDIPPVERPDPYAGLKFREIDLTNKLSSNLSESELGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3349 | |
| 2 | P | A | 0.2067 | |
| 3 | A | A | 0.8202 | |
| 4 | L | A | 1.7758 | |
| 5 | L | A | 1.3136 | |
| 6 | N | A | -0.7241 | |
| 7 | P | A | -1.4389 | |
| 8 | E | A | -2.5607 | |
| 9 | P | A | -2.4947 | |
| 10 | E | A | -2.5251 | |
| 11 | V | A | -1.4076 | |
| 12 | R | A | -2.2306 | |
| 13 | S | A | -2.2646 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.2135 | |
| 16 | E | A | -2.9613 | |
| 17 | F | A | -1.5995 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6962 | |
| 20 | P | A | -0.7738 | |
| 21 | T | A | -0.8077 | |
| 22 | D | A | -1.6141 | |
| 23 | L | A | -0.4925 | |
| 24 | L | A | -0.1399 | |
| 25 | Y | A | -0.0562 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.2619 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.4278 | |
| 31 | L | A | 0.1671 | |
| 32 | L | A | -0.1057 | |
| 33 | T | A | -0.3048 | |
| 34 | E | A | -0.4680 | |
| 35 | T | A | -0.4329 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -1.6031 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5569 | |
| 40 | K | A | -1.9958 | |
| 41 | D | A | -0.7184 | |
| 42 | I | A | 1.3275 | |
| 43 | V | A | 2.3041 | |
| 44 | V | A | 1.8009 | |
| 45 | N | A | -0.4771 | |
| 46 | G | A | -0.3169 | |
| 47 | K | A | -0.0611 | |
| 48 | V | A | 2.0167 | |
| 49 | V | A | 2.5940 | |
| 50 | V | A | 1.2187 | |
| 51 | P | A | -0.0440 | |
| 52 | K | A | -1.0831 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2542 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.1323 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.5067 | |
| 70 | K | A | -1.9937 | |
| 71 | L | A | -0.7634 | |
| 72 | P | A | -0.4993 | |
| 73 | L | A | -0.1342 | |
| 74 | P | A | -0.2933 | |
| 75 | S | A | -0.4653 | |
| 76 | A | A | -0.6158 | |
| 77 | D | A | -1.3749 | |
| 78 | F | A | -0.0653 | |
| 79 | L | A | -0.2374 | |
| 80 | D | A | -1.4087 | |
| 81 | P | A | -1.2016 | |
| 82 | S | A | -1.3887 | |
| 83 | T | A | -0.9083 | |
| 84 | E | A | -0.9058 | |
| 85 | I | A | 0.0000 | |
| 86 | R | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.2418 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.2213 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | H | A | -1.0622 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -0.9238 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.6340 | |
| 99 | G | A | -0.8898 | |
| 100 | P | A | -0.6342 | |
| 101 | L | A | -0.4635 | |
| 102 | G | A | -1.0657 | |
| 103 | K | A | -1.5411 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.6914 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8981 | |
| 108 | H | A | 0.0000 | |
| 109 | K | A | -2.4773 | |
| 110 | N | A | -2.5806 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -0.9309 | |
| 115 | G | A | -1.1105 | |
| 116 | D | A | -1.5816 | |
| 117 | V | A | -1.0279 | |
| 118 | S | A | -1.5572 | |
| 119 | N | A | -1.9296 | |
| 120 | P | A | -0.9850 | |
| 121 | T | A | -0.6389 | |
| 122 | T | A | -0.3545 | |
| 123 | P | A | 0.1280 | |
| 124 | V | A | -0.0295 | |
| 125 | H | A | -0.2884 | |
| 126 | G | A | -1.1617 | |
| 127 | T | A | -1.1823 | |
| 128 | A | A | -1.2000 | |
| 129 | D | A | -2.5869 | |
| 130 | D | A | -2.2899 | |
| 131 | R | A | -2.7356 | |
| 132 | K | A | -2.2499 | |
| 133 | A | A | -1.5431 | |
| 134 | L | A | -0.8669 | |
| 135 | S | A | -0.6642 | |
| 136 | Y | A | 0.0000 | |
| 137 | T | A | -0.4118 | |
| 138 | P | A | 0.0000 | |
| 139 | I | A | -0.6472 | |
| 140 | R | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | N | A | 0.0000 | |
| 149 | R | A | -0.7464 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.8044 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -1.2201 | |
| 155 | Y | A | 0.0000 | |
| 156 | T | A | -0.9815 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.5798 | |
| 159 | A | A | -0.6413 | |
| 160 | A | A | -0.4156 | |
| 161 | P | A | -0.5717 | |
| 162 | S | A | -0.4180 | |
| 163 | P | A | -0.4491 | |
| 164 | G | A | -0.3867 | |
| 165 | L | A | -0.1446 | |
| 166 | P | A | -0.5224 | |
| 167 | P | A | -0.7283 | |
| 168 | G | A | -0.7814 | |
| 169 | A | A | -0.8785 | |
| 170 | E | A | -1.8883 | |
| 171 | P | A | -1.1899 | |
| 172 | P | A | -0.9866 | |
| 173 | T | A | -1.1271 | |
| 174 | E | A | -1.5838 | |
| 175 | T | A | -1.1373 | |
| 176 | V | A | -1.0060 | |
| 177 | H | A | -1.7015 | |
| 178 | D | A | -1.6052 | |
| 179 | T | A | -1.0599 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.0545 | |
| 182 | H | A | -1.1359 | |
| 183 | G | A | -0.7932 | |
| 184 | D | A | -0.9590 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.3818 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4029 | |
| 190 | F | A | -0.0489 | |
| 191 | G | A | -0.3138 | |
| 192 | A | A | -0.6088 | |
| 193 | K | A | -0.8800 | |
| 194 | D | A | -0.9413 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.3337 | |
| 197 | A | A | -0.3919 | |
| 198 | L | A | -0.5317 | |
| 199 | L | A | -1.0356 | |
| 200 | P | A | -1.5158 | |
| 201 | E | A | -2.4192 | |
| 202 | K | A | -2.6486 | |
| 203 | D | A | 0.0000 | |
| 204 | D | A | -1.2324 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.9103 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.6195 | |
| 211 | D | A | -2.2065 | |
| 212 | T | A | -1.5110 | |
| 213 | K | A | -1.6515 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | -0.0749 | |
| 217 | P | A | -0.4872 | |
| 218 | D | A | 0.0000 | |
| 219 | I | A | -1.0851 | |
| 220 | E | A | -2.3190 | |
| 221 | G | A | -1.7398 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.1632 | |
| 224 | A | A | -1.3564 | |
| 225 | E | A | -1.3173 | |
| 226 | P | A | -0.9666 | |
| 227 | Y | A | -0.6160 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | R | A | -0.7372 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.3260 | |
| 234 | Y | A | -0.1644 | |
| 235 | D | A | -1.2334 | |
| 236 | E | A | -1.6332 | |
| 237 | K | A | -1.3829 | |
| 238 | T | A | -0.6830 | |
| 239 | S | A | -0.9053 | |
| 240 | S | A | -1.5350 | |
| 241 | K | A | -2.6530 | |
| 242 | D | A | -2.5240 | |
| 243 | V | A | -0.6478 | |
| 244 | K | A | -2.1789 | |
| 245 | K | A | -2.2472 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.4992 | |
| 250 | G | A | -0.8094 | |
| 251 | P | A | -0.7864 | |
| 252 | D | A | -0.6278 | |
| 253 | L | A | 0.0531 | |
| 254 | H | A | -0.7296 | |
| 255 | P | A | -0.3995 | |
| 256 | L | A | 0.7794 | |
| 257 | P | A | -0.1771 | |
| 258 | D | A | -1.2320 | |
| 259 | S | A | -0.5848 | |
| 260 | P | A | -0.2900 | |
| 261 | P | A | -0.4238 | |
| 262 | P | A | -0.4156 | |
| 263 | S | A | -0.3455 | |
| 264 | P | A | -0.2253 | |
| 265 | L | A | 1.0846 | |
| 266 | Y | A | 0.2225 | |
| 267 | T | A | -0.8512 | |
| 268 | K | A | -1.8647 | |
| 269 | P | A | -0.9575 | |
| 270 | P | A | -1.2250 | |
| 271 | P | A | -1.0928 | |
| 272 | D | A | -1.6539 | |
| 273 | S | A | -0.6264 | |
| 274 | P | A | 0.0816 | |
| 275 | Y | A | 0.9082 | |
| 276 | A | A | 0.3203 | |
| 277 | I | A | 1.5265 | |
| 278 | R | A | -0.0350 | |
| 279 | P | A | -0.3229 | |
| 280 | P | A | -0.6957 | |
| 281 | T | A | -0.7241 | |
| 282 | D | A | -1.3398 | |
| 283 | Y | A | 0.0962 | |
| 284 | F | A | -0.4328 | |
| 285 | T | A | -1.0831 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.5318 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | 0.0000 | |
| 291 | E | A | -2.1167 | |
| 292 | I | A | -1.3848 | |
| 293 | T | A | -1.8181 | |
| 294 | K | A | -2.5776 | |
| 295 | E | A | -2.8320 | |
| 296 | D | A | -2.1579 | |
| 297 | E | A | 0.0000 | |
| 298 | I | A | -1.2777 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.5099 | |
| 301 | K | A | -1.7155 | |
| 302 | P | A | -1.0199 | |
| 303 | V | A | -0.0922 | |
| 304 | F | A | -0.3978 | |
| 305 | L | A | -0.9502 | |
| 306 | E | A | -2.4297 | |
| 307 | K | A | -2.8447 | |
| 308 | T | A | 0.0000 | |
| 309 | A | A | -0.8268 | |
| 310 | G | A | -1.2476 | |
| 311 | K | A | -2.0513 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.6117 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -0.7533 | |
| 319 | N | A | -0.7610 | |
| 320 | R | A | -0.9451 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | -0.8458 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.3853 | |
| 333 | I | A | -1.9377 | |
| 334 | E | A | -2.3979 | |
| 335 | T | A | -1.1290 | |
| 336 | I | A | 0.5682 | |
| 337 | T | A | 0.7208 | |
| 338 | T | A | 0.8293 | |
| 339 | R | A | 0.0595 | |
| 340 | V | A | 1.5438 | |
| 341 | A | A | 0.2540 | |
| 342 | T | A | -0.5124 | |
| 343 | P | A | -1.3302 | |
| 344 | E | A | -1.9348 | |
| 345 | P | A | -1.1530 | |
| 346 | D | A | -1.2178 | |
| 347 | V | A | 1.1885 | |
| 348 | Y | A | 1.2887 | |
| 349 | D | A | 0.2291 | |
| 350 | P | A | 0.0713 | |
| 351 | S | A | 0.4308 | |
| 352 | Y | A | 0.9962 | |
| 353 | Y | A | 1.5510 | |
| 354 | V | A | 2.1881 | |
| 355 | T | A | 0.7099 | |
| 356 | S | A | -0.3704 | |
| 357 | K | A | -1.8296 | |
| 358 | R | A | -1.7413 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.9406 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.6344 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -1.2564 | |
| 365 | I | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.2818 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | I | A | 0.1524 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.5480 | |
| 376 | L | A | -0.7211 | |
| 377 | T | A | -0.9593 | |
| 378 | P | A | -1.3265 | |
| 379 | E | A | -2.0960 | |
| 380 | T | A | -1.7385 | |
| 381 | R | A | -1.8603 | |
| 382 | A | A | -1.7965 | |
| 383 | Y | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -2.3922 | |
| 386 | R | A | -2.6229 | |
| 387 | L | A | -1.3288 | |
| 388 | D | A | -1.3299 | |
| 389 | P | A | -1.5241 | |
| 390 | S | A | -0.9823 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.3078 | |
| 394 | D | A | -1.7706 | |
| 395 | A | A | -1.7843 | |
| 396 | E | A | -2.5267 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | -1.6193 | |
| 399 | D | A | -2.1325 | |
| 400 | I | A | -1.0176 | |
| 401 | P | A | -0.7021 | |
| 402 | P | A | -0.6958 | |
| 403 | V | A | 0.2156 | |
| 404 | E | A | -1.6460 | |
| 405 | R | A | -1.6395 | |
| 406 | P | A | -1.2087 | |
| 407 | D | A | -1.1835 | |
| 408 | P | A | -0.6354 | |
| 409 | Y | A | -0.4302 | |
| 410 | A | A | -0.5408 | |
| 411 | G | A | -0.6638 | |
| 412 | L | A | -0.6743 | |
| 413 | K | A | -1.9623 | |
| 414 | F | A | -1.3424 | |
| 415 | R | A | -1.6476 | |
| 416 | E | A | -2.4623 | |
| 417 | I | A | -1.8266 | |
| 418 | D | A | -2.5385 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.3601 | |
| 421 | N | A | -1.8863 | |
| 422 | K | A | -1.7271 | |
| 423 | L | A | -0.6006 | |
| 424 | S | A | -0.8004 | |
| 425 | S | A | -0.5580 | |
| 426 | N | A | -1.3965 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -2.0457 | |
| 429 | E | A | -2.8113 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.8672 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.7630 | |
| 435 | E | A | -2.0338 | |
| 436 | Y | A | -0.9112 | |
| 437 | L | A | -0.2525 | |
| 438 | N | A | -1.9423 | |
| 439 | R | A | -2.1747 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine