| Chain sequence(s) |
A: CAKKRNWCGKNEDCCCPMKCIYAWYNQQGSCQTTITGLFKKC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.1359 | |
| 2 | A | A | -1.3436 | |
| 3 | K | A | -2.6129 | |
| 4 | K | A | -2.6317 | |
| 5 | R | A | -3.0535 | |
| 6 | N | A | -2.3352 | |
| 7 | W | A | -1.3214 | |
| 8 | C | A | -1.9658 | |
| 9 | G | A | -1.8661 | |
| 10 | K | A | -2.9521 | |
| 11 | N | A | -3.0545 | |
| 12 | E | A | -3.5459 | |
| 13 | D | A | -2.8908 | |
| 14 | C | A | -1.6794 | |
| 15 | C | A | -0.2005 | |
| 16 | C | A | -0.0877 | |
| 17 | P | A | 0.6966 | |
| 18 | M | A | -0.1493 | |
| 19 | K | A | -0.9287 | |
| 20 | C | A | 0.0000 | |
| 21 | I | A | 0.1730 | |
| 22 | Y | A | 0.5633 | |
| 23 | A | A | 1.0377 | |
| 24 | W | A | 1.4285 | |
| 25 | Y | A | 1.0496 | |
| 26 | N | A | -0.7525 | |
| 27 | Q | A | -1.7061 | |
| 28 | Q | A | -1.0769 | |
| 29 | G | A | 0.0000 | |
| 30 | S | A | -0.9696 | |
| 31 | C | A | 0.0000 | |
| 32 | Q | A | -0.8687 | |
| 33 | T | A | 0.3172 | |
| 34 | T | A | 1.2545 | |
| 35 | I | A | 2.2858 | |
| 36 | T | A | 1.3385 | |
| 37 | G | A | 0.0000 | |
| 38 | L | A | 2.1645 | |
| 39 | F | A | 1.9423 | |
| 40 | K | A | -0.1061 | |
| 41 | K | A | -0.8948 | |
| 42 | C | A | 0.1782 |