| Chain sequence(s) |
A: FFKGHGG
C: FFKGHGG B: FFKGHGG E: FFKGHGG D: FFKGHGG G: FFKGHGG F: FFKGHGG I: FFKGHGG H: FFKGHGG K: FFKGHGG J: FFKGHGG L: FFKGHGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:59)
[INFO] Main: Simulation completed successfully. (00:05:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.6437 | |
| 2 | F | A | -0.0162 | |
| 3 | K | A | -2.0448 | |
| 4 | G | A | -1.9601 | |
| 5 | H | A | -2.1403 | |
| 6 | G | A | -1.7316 | |
| 7 | G | A | -1.0040 | |
| 1 | F | B | 2.0799 | |
| 2 | F | B | 0.7297 | |
| 3 | K | B | -0.8522 | |
| 4 | G | B | -1.5921 | |
| 5 | H | B | -2.2976 | |
| 6 | G | B | -1.8964 | |
| 7 | G | B | -1.3050 | |
| 1 | F | C | 2.3240 | |
| 2 | F | C | 0.8268 | |
| 3 | K | C | -0.5039 | |
| 4 | G | C | -1.5150 | |
| 5 | H | C | -2.3121 | |
| 6 | G | C | -1.7268 | |
| 7 | G | C | -1.1505 | |
| 1 | F | D | 2.1281 | |
| 2 | F | D | 0.1720 | |
| 3 | K | D | -1.1977 | |
| 4 | G | D | -1.9589 | |
| 5 | H | D | -2.1678 | |
| 6 | G | D | -1.7626 | |
| 7 | G | D | -1.0529 | |
| 1 | F | E | 1.9188 | |
| 2 | F | E | 0.1426 | |
| 3 | K | E | -1.4989 | |
| 4 | G | E | -2.1065 | |
| 5 | H | E | -2.3406 | |
| 6 | G | E | -1.6541 | |
| 7 | G | E | -1.0408 | |
| 1 | F | F | 2.3204 | |
| 2 | F | F | 1.6048 | |
| 3 | K | F | -0.8193 | |
| 4 | G | F | -1.5693 | |
| 5 | H | F | -2.2563 | |
| 6 | G | F | -1.6413 | |
| 7 | G | F | -1.1795 | |
| 1 | F | G | 2.2473 | |
| 2 | F | G | 0.0000 | |
| 3 | K | G | -0.2993 | |
| 4 | G | G | -1.4791 | |
| 5 | H | G | -2.1135 | |
| 6 | G | G | -1.7797 | |
| 7 | G | G | -1.0271 | |
| 1 | F | H | 1.9788 | |
| 2 | F | H | 0.2559 | |
| 3 | K | H | -0.8055 | |
| 4 | G | H | -1.9091 | |
| 5 | H | H | -2.2855 | |
| 6 | G | H | -1.6170 | |
| 7 | G | H | -1.0472 | |
| 1 | F | I | 2.3588 | |
| 2 | F | I | 0.1386 | |
| 3 | K | I | -1.5912 | |
| 4 | G | I | -1.7927 | |
| 5 | H | I | -2.2546 | |
| 6 | G | I | -1.6553 | |
| 7 | G | I | -0.9225 | |
| 1 | F | J | 2.5238 | |
| 2 | F | J | 0.9879 | |
| 3 | K | J | -0.6671 | |
| 4 | G | J | -1.4077 | |
| 5 | H | J | -2.0925 | |
| 6 | G | J | -1.4828 | |
| 7 | G | J | -1.0193 | |
| 1 | F | K | 2.3686 | |
| 2 | F | K | 1.7172 | |
| 3 | K | K | -0.1709 | |
| 4 | G | K | -0.9901 | |
| 5 | H | K | -1.7289 | |
| 6 | G | K | -1.4021 | |
| 7 | G | K | -1.0529 | |
| 1 | F | L | 2.3395 | |
| 2 | F | L | 1.0644 | |
| 3 | K | L | 0.1280 | |
| 4 | G | L | -0.9398 | |
| 5 | H | L | -1.6460 | |
| 6 | G | L | -1.5515 | |
| 7 | G | L | -1.0223 |