| Chain sequence(s) |
L: CELVYTMGNYGYAC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | C | L | 0.4086 | |
| 1 | E | L | -1.3995 | |
| 2 | L | L | 1.5386 | |
| 3 | V | L | 2.2825 | |
| 4 | Y | L | 1.6232 | |
| 5 | T | L | 0.2678 | |
| 6 | M | L | 0.1984 | |
| 7 | G | L | -0.6485 | |
| 8 | N | L | -1.1275 | |
| 9 | Y | L | 1.0079 | |
| 10 | G | L | 0.0120 | |
| 11 | Y | L | 1.2402 | |
| 12 | A | L | 0.3161 | |
| 13 | C | L | 0.0166 |