| Chain sequence(s) |
A: MSHHHHHHSGNIIEFVKELMEKTKDTDEIVDKIYDYLNNLVKETGLPWTKWGELYRQAMHVLFSLLDGEEPELPKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:58)
[INFO] Main: Simulation completed successfully. (00:01:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5307 | |
| 2 | S | A | -0.6341 | |
| 3 | H | A | -1.7575 | |
| 4 | H | A | -2.3753 | |
| 5 | H | A | -2.8180 | |
| 6 | H | A | -2.8224 | |
| 7 | H | A | -2.5407 | |
| 8 | H | A | -2.2849 | |
| 9 | S | A | -1.4054 | |
| 10 | G | A | -1.4796 | |
| 11 | N | A | -1.7386 | |
| 12 | I | A | 0.0000 | |
| 13 | I | A | 0.0000 | |
| 14 | E | A | -2.7218 | |
| 15 | F | A | -1.7508 | |
| 16 | V | A | 0.0000 | |
| 17 | K | A | -2.8540 | |
| 18 | E | A | -3.5133 | |
| 19 | L | A | 0.0000 | |
| 20 | M | A | 0.0000 | |
| 21 | E | A | -3.7010 | |
| 22 | K | A | -3.6255 | |
| 23 | T | A | -3.1143 | |
| 24 | K | A | -3.4679 | |
| 25 | D | A | -3.5778 | |
| 26 | T | A | -2.4778 | |
| 27 | D | A | -3.4918 | |
| 28 | E | A | -3.4259 | |
| 29 | I | A | 0.0000 | |
| 30 | V | A | -1.6938 | |
| 31 | D | A | -2.9057 | |
| 32 | K | A | -2.4427 | |
| 33 | I | A | 0.0000 | |
| 34 | Y | A | -0.8633 | |
| 35 | D | A | -2.1412 | |
| 36 | Y | A | -0.9771 | |
| 37 | L | A | 0.0000 | |
| 38 | N | A | -1.3576 | |
| 39 | N | A | -1.9952 | |
| 40 | L | A | 0.0000 | |
| 41 | V | A | -1.4911 | |
| 42 | K | A | -2.8022 | |
| 43 | E | A | -2.8496 | |
| 44 | T | A | -1.8975 | |
| 45 | G | A | -1.2542 | |
| 46 | L | A | -0.6676 | |
| 47 | P | A | 0.0786 | |
| 48 | W | A | 0.5744 | |
| 49 | T | A | -0.3639 | |
| 50 | K | A | -1.2188 | |
| 51 | W | A | -0.4796 | |
| 52 | G | A | -1.1801 | |
| 53 | E | A | -2.4786 | |
| 54 | L | A | -1.4876 | |
| 55 | Y | A | -1.1354 | |
| 56 | R | A | -2.6784 | |
| 57 | Q | A | -1.8052 | |
| 58 | A | A | 0.0000 | |
| 59 | M | A | -0.3773 | |
| 60 | H | A | -0.9245 | |
| 61 | V | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | F | A | 0.8249 | |
| 64 | S | A | 0.0000 | |
| 65 | L | A | -0.7085 | |
| 66 | L | A | -0.1761 | |
| 67 | D | A | -1.8060 | |
| 68 | G | A | -1.9444 | |
| 69 | E | A | -3.1998 | |
| 70 | E | A | -2.9477 | |
| 71 | P | A | 0.0000 | |
| 72 | E | A | -2.2651 | |
| 73 | L | A | -0.3862 | |
| 74 | P | A | -1.2173 | |
| 75 | K | A | -2.3780 | |
| 76 | N | A | -2.0659 | |
| 77 | S | A | -1.4024 |