| Chain sequence(s) |
A: DKLIGSCVWGAVNYTSDCNGECKRRGYKGGHCGSFANVNCWCET
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.7946 | |
| 2 | K | A | -1.5537 | |
| 3 | L | A | 0.1166 | |
| 4 | I | A | -0.3753 | |
| 5 | G | A | 0.0000 | |
| 6 | S | A | 0.4735 | |
| 7 | C | A | 0.0000 | |
| 8 | V | A | 1.6462 | |
| 9 | W | A | 1.4930 | |
| 10 | G | A | 0.7132 | |
| 11 | A | A | 1.0401 | |
| 12 | V | A | 1.4583 | |
| 13 | N | A | 0.0415 | |
| 14 | Y | A | 0.6383 | |
| 15 | T | A | 0.0000 | |
| 16 | S | A | -1.3192 | |
| 17 | D | A | -2.7948 | |
| 18 | C | A | 0.0000 | |
| 19 | N | A | -3.6252 | |
| 20 | G | A | 0.0000 | |
| 21 | E | A | -3.9975 | |
| 22 | C | A | 0.0000 | |
| 23 | K | A | -4.7262 | |
| 24 | R | A | -4.4896 | |
| 25 | R | A | -4.0699 | |
| 26 | G | A | -2.9919 | |
| 27 | Y | A | -3.4260 | |
| 28 | K | A | -3.6185 | |
| 29 | G | A | -3.1421 | |
| 30 | G | A | 0.0000 | |
| 31 | H | A | -1.7406 | |
| 32 | C | A | -0.5063 | |
| 33 | G | A | -0.4311 | |
| 34 | S | A | 0.2695 | |
| 35 | F | A | 1.6189 | |
| 36 | A | A | 0.6310 | |
| 37 | N | A | -0.0638 | |
| 38 | V | A | 1.0663 | |
| 39 | N | A | 0.3441 | |
| 40 | C | A | 0.0000 | |
| 41 | W | A | -0.7875 | |
| 42 | C | A | 0.0000 | |
| 43 | E | A | -2.9518 | |
| 44 | T | A | -2.0364 |