Project name: query_structure

Status: done

Started: 2026-03-16 23:03:49
Settings
Chain sequence(s) A: DKLIGSCVWGAVNYTSDCNGECKRRGYKGGHCGSFANVNCWCET
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-4.7262
Maximal score value
1.6462
Average score
-0.9066
Total score value
-39.8915

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.7946
2 K A -1.5537
3 L A 0.1166
4 I A -0.3753
5 G A 0.0000
6 S A 0.4735
7 C A 0.0000
8 V A 1.6462
9 W A 1.4930
10 G A 0.7132
11 A A 1.0401
12 V A 1.4583
13 N A 0.0415
14 Y A 0.6383
15 T A 0.0000
16 S A -1.3192
17 D A -2.7948
18 C A 0.0000
19 N A -3.6252
20 G A 0.0000
21 E A -3.9975
22 C A 0.0000
23 K A -4.7262
24 R A -4.4896
25 R A -4.0699
26 G A -2.9919
27 Y A -3.4260
28 K A -3.6185
29 G A -3.1421
30 G A 0.0000
31 H A -1.7406
32 C A -0.5063
33 G A -0.4311
34 S A 0.2695
35 F A 1.6189
36 A A 0.6310
37 N A -0.0638
38 V A 1.0663
39 N A 0.3441
40 C A 0.0000
41 W A -0.7875
42 C A 0.0000
43 E A -2.9518
44 T A -2.0364
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Laboratory of Theory of Biopolymers 2018