| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPTFRTYYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTWQLMPSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:47)
[INFO] Main: Simulation completed successfully. (00:00:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7330 | |
| 2 | S | A | 0.1935 | |
| 3 | D | A | -0.8433 | |
| 4 | V | A | -1.0724 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.1258 | |
| 7 | D | A | -3.3412 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.0980 | |
| 10 | V | A | 0.1113 | |
| 11 | V | A | 1.5499 | |
| 12 | A | A | 0.9035 | |
| 13 | A | A | 0.3187 | |
| 14 | T | A | -0.3390 | |
| 15 | P | A | -1.1166 | |
| 16 | T | A | -0.9981 | |
| 17 | S | A | -0.5275 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7600 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1344 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2188 | |
| 24 | A | A | -1.8844 | |
| 25 | P | A | -0.7525 | |
| 26 | T | A | -0.0537 | |
| 27 | F | A | 0.4418 | |
| 28 | R | A | -0.9279 | |
| 29 | T | A | 0.0774 | |
| 30 | Y | A | 1.4539 | |
| 31 | Y | A | 0.4559 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.4685 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5938 | |
| 36 | Y | A | -0.3911 | |
| 37 | G | A | -0.8830 | |
| 38 | E | A | -1.9383 | |
| 39 | T | A | -1.6159 | |
| 40 | G | A | -1.4041 | |
| 41 | G | A | -1.5752 | |
| 42 | N | A | -1.5848 | |
| 43 | S | A | -0.9659 | |
| 44 | P | A | -0.4209 | |
| 45 | V | A | 0.2845 | |
| 46 | Q | A | -1.1058 | |
| 47 | E | A | -1.7549 | |
| 48 | F | A | -0.7022 | |
| 49 | T | A | -0.3098 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.4842 | |
| 52 | G | A | -0.5093 | |
| 53 | S | A | -1.1056 | |
| 54 | K | A | -2.0896 | |
| 55 | S | A | -1.4456 | |
| 56 | T | A | -0.7760 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2414 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6606 | |
| 61 | G | A | -1.0301 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.5016 | |
| 64 | P | A | -1.7958 | |
| 65 | G | A | -1.6747 | |
| 66 | V | A | -1.8919 | |
| 67 | D | A | -3.0715 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -1.0189 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.3414 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.3310 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | T | A | 0.9893 | |
| 77 | W | A | 1.1947 | |
| 78 | Q | A | 0.4427 | |
| 79 | L | A | 1.9099 | |
| 80 | M | A | 1.3190 | |
| 81 | P | A | 0.1208 | |
| 82 | S | A | 0.0000 | |
| 83 | K | A | -1.7104 | |
| 84 | P | A | -1.0206 | |
| 85 | I | A | -0.6120 | |
| 86 | S | A | -0.8413 | |
| 87 | I | A | -0.7415 | |
| 88 | N | A | -1.9663 | |
| 89 | Y | A | -1.8043 | |
| 90 | R | A | -2.9637 | |
| 91 | T | A | -1.8611 |