Project name: query_structure

Status: done

Started: 2026-03-17 00:14:21
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Chain sequence(s) A: MVQLQESGGGSVQAGGSLRLSCVASGDTASMYCMGWFRQAPGKEREEVATIDSDGSVSIADSLKGRFTISKDSANNALYLHMNSLRPEDTANYYCAAGRPPCGSIFKPGYYYYGMDYWGKGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:06)
Show buried residues

Minimal score value
-4.0289
Maximal score value
2.7442
Average score
-0.7733
Total score value
-98.9869

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1609
2 V A 0.0000
3 Q A -1.5979
4 L A 0.0000
5 Q A -1.5348
6 E A 0.0000
7 S A -0.5443
8 G A -0.7779
9 G A -0.3407
10 G A -0.2098
11 S A -0.3174
12 V A -0.8814
13 Q A -1.7260
14 A A -1.9586
15 G A -1.6543
16 G A -1.3735
17 S A -1.6201
18 L A -1.2685
19 R A -2.0995
20 L A 0.0000
21 S A -0.5952
22 C A 0.0000
23 V A -0.1102
24 A A 0.0000
25 S A -1.2549
26 G A -1.4284
27 D A -1.9594
28 T A -1.2413
29 A A -0.6897
30 S A -0.6877
31 M A 0.0000
32 Y A -0.2433
33 C A 0.0000
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A -1.1762
38 R A -1.8548
39 Q A -2.6196
40 A A -2.1218
41 P A -1.6206
42 G A -2.0358
43 K A -3.5279
44 E A -4.0289
45 R A -3.7334
46 E A -3.0869
47 E A -2.3123
48 V A 0.0000
49 A A 0.0000
50 T A 0.0000
51 I A 0.0000
52 D A -0.7450
53 S A -1.2713
54 D A -1.9808
55 G A -1.1965
56 S A -0.4552
57 V A 0.7964
58 S A 0.0785
59 I A -0.6126
60 A A -1.6896
61 D A -2.3990
62 S A -1.6233
63 L A 0.0000
64 K A -2.5828
65 G A -1.8958
66 R A -1.7245
67 F A 0.0000
68 T A -0.7941
69 I A 0.0000
70 S A -0.4039
71 K A -1.1994
72 D A -1.2347
73 S A -1.0839
74 A A -1.0290
75 N A -1.5926
76 N A -1.1583
77 A A 0.0000
78 L A 0.0000
79 Y A -0.4953
80 L A 0.0000
81 H A -1.4484
82 M A 0.0000
83 N A -2.2875
84 S A -1.7507
85 L A 0.0000
86 R A -3.0379
87 P A -2.1597
88 E A -2.5004
89 D A 0.0000
90 T A -0.9619
91 A A 0.0000
92 N A -0.3271
93 Y A 0.0000
94 Y A -0.7436
95 C A 0.0000
96 A A 0.0000
97 A A 0.0000
98 G A 0.0000
99 R A -1.8117
100 P A -1.0742
101 P A -0.8732
102 C A 0.0000
103 G A -0.8304
104 S A 0.2802
105 I A 0.9797
106 F A 0.0730
107 K A -1.0276
108 P A -0.6018
109 G A 0.1387
110 Y A 1.8068
111 Y A 2.7442
112 Y A 2.6155
113 Y A 2.1798
114 G A 0.2854
115 M A -0.3923
116 D A -1.5619
117 Y A -0.8370
118 W A -0.5918
119 G A -1.0520
120 K A -2.0115
121 G A 0.0000
122 T A -0.1171
123 L A 0.9886
124 V A 0.0000
125 T A -0.4911
126 V A 0.0000
127 S A -1.2538
128 S A -0.9694
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Laboratory of Theory of Biopolymers 2018