Project name: 2abc0a85d88a6d2

Status: done

Started: 2025-12-14 16:00:13
Settings
Chain sequence(s) A: QVQLQESGPGLVKPSETLSLTCTVSGFSLTSYGVHWIRQPPGKGLEWIGVIYADGSTNYNPSLKSRVTISKDTSKNQVSLKLSSVTAADTAVYYCARAYGNYWYIDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVES
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:34)
Show buried residues

Minimal score value
-2.8863
Maximal score value
2.4912
Average score
-0.525
Total score value
-114.4469

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4913
2 V A -0.8962
3 Q A -1.7770
4 L A 0.0000
5 Q A -1.8515
6 E A 0.0000
7 S A -0.8307
8 G A -0.5117
9 P A -0.4966
10 G A -0.5319
11 L A -0.5492
12 V A 0.0000
13 K A -2.1249
14 P A -1.4064
15 S A -1.2461
16 E A -1.5843
17 T A -1.1776
18 L A 0.0000
19 S A -0.7811
20 L A 0.0000
21 T A -0.6910
22 C A 0.0000
23 T A -1.2754
24 V A 0.0000
25 S A -1.1738
26 G A -1.0205
27 F A -0.4145
28 S A -0.4704
29 L A 0.0000
30 T A -0.6299
31 S A -0.3015
32 Y A 0.0737
33 G A 0.1726
34 V A 0.0000
35 H A 0.0000
36 W A 0.0000
37 I A 0.0000
38 R A -0.1296
39 Q A -0.5525
40 P A -0.8958
41 P A -1.0300
42 G A -1.4283
43 K A -2.0875
44 G A -0.9053
45 L A 0.5819
46 E A -0.0582
47 W A 0.3574
48 I A 0.0000
49 G A 0.0000
50 V A 0.0000
51 I A 0.0000
52 Y A -0.3875
53 A A -0.7437
54 D A -1.8056
55 G A -1.2217
56 S A -0.8820
57 T A -0.7290
58 N A -0.9314
59 Y A -0.6168
60 N A -0.7951
61 P A -1.1502
62 S A -0.9918
63 L A 0.0000
64 K A -2.0730
65 S A -1.3245
66 R A -1.3052
67 V A 0.0000
68 T A -0.6934
69 I A 0.0000
70 S A -0.7662
71 K A -1.2075
72 D A -1.6769
73 T A -1.3763
74 S A -1.4730
75 K A -2.3219
76 N A -1.6694
77 Q A -1.6112
78 V A 0.0000
79 S A -0.7289
80 L A 0.0000
81 K A -1.2484
82 L A 0.0000
83 S A -0.9593
84 S A -0.9317
85 V A 0.0000
86 T A -0.5658
87 A A -0.2437
88 A A 0.0471
89 D A 0.0000
90 T A -0.0443
91 A A 0.0000
92 V A 0.1305
93 Y A 0.0000
94 Y A -0.0421
95 C A 0.0000
96 A A 0.0000
97 R A 0.0000
98 A A 0.0000
99 Y A 1.2778
100 G A 0.3059
101 N A -0.1649
102 Y A 1.3814
103 W A 1.8443
104 Y A 2.1071
105 I A 1.3722
106 D A 0.6490
107 V A 0.4454
108 W A 0.0166
109 G A -0.9248
110 Q A -1.5062
111 G A -0.7659
112 T A -0.5526
113 T A -0.2722
114 V A 0.0000
115 T A 0.0000
116 V A 0.0000
117 S A -0.7681
118 S A -0.9108
119 A A -0.5774
120 S A -0.7074
121 T A -0.7114
122 K A -1.5746
123 G A -1.6468
124 P A -0.8380
125 S A -0.3905
126 V A 0.0000
127 F A 0.4901
128 P A -0.2640
129 L A 0.3190
130 A A -0.3406
131 P A -0.5278
132 C A 0.0679
133 S A -0.8402
134 R A -2.2441
135 S A -1.5337
136 T A -1.2000
137 S A -1.2710
138 E A -2.1036
139 S A -1.1781
140 T A -0.8233
141 A A 0.0000
142 A A 0.1759
143 L A 0.0000
144 G A 0.0000
145 C A 0.0000
146 L A 0.4314
147 V A 0.0000
148 K A -0.3764
149 D A -1.0756
150 Y A 0.0000
151 F A -0.3777
152 P A 0.0000
153 E A -0.5260
154 P A -0.6152
155 V A -0.3616
156 T A -0.4978
157 V A -0.1910
158 S A -0.4662
159 W A 0.0000
160 N A -0.9184
161 S A -0.7592
162 G A -0.5896
163 A A -0.2229
164 L A -0.0402
165 T A -0.3063
166 S A -0.4229
167 G A -0.4862
168 V A -0.0008
169 H A -0.3756
170 T A 0.2773
171 F A 1.1000
172 P A 0.8077
173 A A 1.2924
174 V A 2.4912
175 L A 1.9573
176 Q A 0.2684
177 S A -0.3153
178 S A -0.4630
179 G A -0.0936
180 L A 0.0363
181 Y A 0.7544
182 S A 0.0000
183 L A 0.0000
184 S A 0.6375
185 S A 0.0000
186 V A 0.5182
187 V A 0.0000
188 T A -0.1918
189 V A 0.0000
190 P A -0.5844
191 S A -0.9234
192 S A -0.7041
193 S A -0.5930
194 L A -1.0400
195 G A -1.0131
196 T A -0.8050
197 K A -1.4607
198 T A -1.4128
199 Y A 0.0000
200 T A 0.0000
201 C A 0.0000
202 N A -1.7245
203 V A 0.0000
204 D A -1.8245
205 H A 0.0000
206 K A -2.6525
207 P A -1.5712
208 S A -1.8349
209 N A -2.6018
210 T A -2.0702
211 K A -2.6601
212 V A -1.7082
213 D A -2.7880
214 K A -2.5050
215 R A -2.8863
216 V A 0.0000
217 E A -2.7817
218 S A -1.5399
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Laboratory of Theory of Biopolymers 2018