| Chain sequence(s) |
A: SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSSARACNPFGWKSIFIQC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.4577 | |
| 2 | A | A | -0.6449 | |
| 3 | F | A | 0.0000 | |
| 4 | T | A | 0.0000 | |
| 5 | V | A | 0.0000 | |
| 6 | W | A | -2.1947 | |
| 7 | S | A | -2.1707 | |
| 8 | G | A | -1.7065 | |
| 9 | P | A | -1.4338 | |
| 10 | G | A | -1.3753 | |
| 11 | C | A | -1.5227 | |
| 12 | N | A | -1.8918 | |
| 13 | N | A | -2.2850 | |
| 14 | R | A | -2.8640 | |
| 15 | A | A | -2.0866 | |
| 16 | E | A | -2.5984 | |
| 17 | R | A | -2.5339 | |
| 18 | Y | A | -1.3287 | |
| 19 | S | A | -1.1732 | |
| 20 | K | A | -1.6067 | |
| 21 | C | A | -0.2519 | |
| 22 | G | A | -0.1298 | |
| 23 | C | A | -0.0057 | |
| 24 | S | A | -0.4824 | |
| 25 | A | A | -0.5896 | |
| 26 | I | A | 0.0000 | |
| 27 | H | A | -1.7363 | |
| 28 | Q | A | -2.3054 | |
| 29 | K | A | -2.5347 | |
| 30 | G | A | 0.0000 | |
| 31 | G | A | 0.0000 | |
| 32 | Y | A | 0.0000 | |
| 33 | D | A | 0.0000 | |
| 34 | F | A | 0.0000 | |
| 35 | S | A | -0.5763 | |
| 36 | Y | A | -0.2008 | |
| 37 | T | A | -0.4170 | |
| 38 | G | A | -0.6572 | |
| 39 | Q | A | -0.4949 | |
| 40 | T | A | -0.6549 | |
| 41 | A | A | 0.0000 | |
| 42 | A | A | 0.0000 | |
| 43 | L | A | 0.0000 | |
| 44 | Y | A | -0.6796 | |
| 45 | N | A | -1.2527 | |
| 46 | Q | A | -1.4694 | |
| 47 | A | A | -1.0677 | |
| 48 | G | A | -0.6819 | |
| 49 | C | A | -0.1624 | |
| 50 | S | A | -0.4470 | |
| 51 | G | A | -0.1522 | |
| 52 | V | A | 1.1037 | |
| 53 | A | A | -0.1435 | |
| 54 | H | A | -1.1695 | |
| 55 | T | A | -1.3738 | |
| 56 | R | A | -1.9491 | |
| 57 | F | A | -0.8532 | |
| 58 | G | A | -0.8895 | |
| 59 | S | A | -0.8547 | |
| 60 | S | A | -0.7589 | |
| 61 | A | A | -0.9740 | |
| 62 | R | A | -1.9664 | |
| 63 | A | A | -1.0958 | |
| 64 | C | A | -0.9416 | |
| 65 | N | A | -1.6833 | |
| 66 | P | A | -1.2120 | |
| 67 | F | A | -1.0669 | |
| 68 | G | A | -0.9691 | |
| 69 | W | A | -1.0387 | |
| 70 | K | A | -1.4938 | |
| 71 | S | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | F | A | 0.1729 | |
| 74 | I | A | 0.0000 | |
| 75 | Q | A | -0.5133 | |
| 76 | C | A | 0.1428 |