| Chain sequence(s) |
B: SLRALMDEAMKAIKKLEEIAELVFEQNPDEELKERLEKKLKKLKELVEKL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:18)
[INFO] Main: Simulation completed successfully. (00:02:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | 0.1389 | |
| 2 | L | B | 0.9914 | |
| 3 | R | B | -1.1538 | |
| 4 | A | B | -0.7747 | |
| 5 | L | B | 0.3024 | |
| 6 | M | B | -1.2429 | |
| 7 | D | B | -3.0276 | |
| 8 | E | B | -2.9357 | |
| 9 | A | B | -1.8300 | |
| 10 | M | B | -2.5328 | |
| 11 | K | B | -3.5700 | |
| 12 | A | B | -2.7027 | |
| 13 | I | B | 0.0000 | |
| 14 | K | B | -3.6935 | |
| 15 | K | B | -3.4623 | |
| 16 | L | B | -1.6957 | |
| 17 | E | B | -2.7291 | |
| 18 | E | B | -2.6085 | |
| 19 | I | B | -0.5532 | |
| 20 | A | B | 0.0000 | |
| 21 | E | B | -2.3558 | |
| 22 | L | B | -0.1890 | |
| 23 | V | B | -0.5045 | |
| 24 | F | B | 0.0000 | |
| 25 | E | B | -2.5124 | |
| 26 | Q | B | -2.3757 | |
| 27 | N | B | -2.6883 | |
| 28 | P | B | -2.8118 | |
| 29 | D | B | -3.6334 | |
| 30 | E | B | -4.1603 | |
| 31 | E | B | -4.0765 | |
| 32 | L | B | -3.2324 | |
| 33 | K | B | -4.3064 | |
| 34 | E | B | -4.8756 | |
| 35 | R | B | -4.8036 | |
| 36 | L | B | -3.8193 | |
| 37 | E | B | -4.5510 | |
| 38 | K | B | -4.8485 | |
| 39 | K | B | -4.3236 | |
| 40 | L | B | 0.0000 | |
| 41 | K | B | -4.2071 | |
| 42 | K | B | -3.7485 | |
| 43 | L | B | -2.2963 | |
| 44 | K | B | -2.8390 | |
| 45 | E | B | -3.0638 | |
| 46 | L | B | -1.2479 | |
| 47 | V | B | 0.0000 | |
| 48 | E | B | -2.7380 | |
| 49 | K | B | -1.9130 | |
| 50 | L | B | 0.4015 |