| Chain sequence(s) |
A: CLASNKVCGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRGV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.5450 | |
| 2 | L | A | 1.4824 | |
| 3 | A | A | -0.1156 | |
| 4 | S | A | -0.8070 | |
| 5 | N | A | -1.0190 | |
| 6 | K | A | -1.2390 | |
| 7 | V | A | -0.1201 | |
| 8 | C | A | 0.1226 | |
| 9 | G | A | 0.0000 | |
| 10 | R | A | -1.5595 | |
| 11 | C | A | -1.0025 | |
| 12 | R | A | -1.9363 | |
| 13 | G | A | -0.5551 | |
| 14 | S | A | 0.5298 | |
| 15 | F | A | 1.5956 | |
| 16 | P | A | 1.0076 | |
| 17 | R | A | 0.3699 | |
| 18 | W | A | -0.2114 | |
| 19 | Y | A | 0.0000 | |
| 20 | Y | A | 0.0000 | |
| 21 | D | A | -0.5371 | |
| 22 | P | A | -0.2567 | |
| 23 | T | A | -1.0702 | |
| 24 | E | A | -2.1756 | |
| 25 | Q | A | -1.4651 | |
| 26 | I | A | -0.1796 | |
| 27 | C | A | -0.7043 | |
| 28 | K | A | -0.8884 | |
| 29 | S | A | -0.3216 | |
| 30 | F | A | 0.7112 | |
| 31 | V | A | 1.9534 | |
| 32 | Y | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | G | A | 0.2130 | |
| 35 | C | A | 0.4048 | |
| 36 | L | A | 1.0061 | |
| 37 | G | A | -0.1536 | |
| 38 | N | A | -0.9218 | |
| 39 | K | A | -1.5731 | |
| 40 | N | A | 0.0000 | |
| 41 | N | A | -0.8770 | |
| 42 | Y | A | -0.6352 | |
| 43 | L | A | 0.1107 | |
| 44 | R | A | -2.0908 | |
| 45 | E | A | -2.0883 | |
| 46 | E | A | -2.2543 | |
| 47 | E | A | -1.2849 | |
| 48 | C | A | 0.0000 | |
| 49 | I | A | 0.3818 | |
| 50 | L | A | 0.1229 | |
| 51 | A | A | 0.2047 | |
| 52 | C | A | 0.0000 | |
| 53 | R | A | -0.8819 | |
| 54 | G | A | -0.2719 | |
| 55 | V | A | 1.2366 |