| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVLYYFITYGETGHGSAYQEFAVPGSKSTATISGLKPGVDYTITVYALWYKGITSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:28)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7811 | |
| 2 | S | A | 0.8180 | |
| 3 | S | A | 0.7446 | |
| 4 | V | A | 0.6666 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6435 | |
| 7 | K | A | -2.6717 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9016 | |
| 10 | V | A | 0.1430 | |
| 11 | V | A | 1.5542 | |
| 12 | A | A | 0.9041 | |
| 13 | A | A | 0.3299 | |
| 14 | T | A | -0.3486 | |
| 15 | P | A | -1.1291 | |
| 16 | T | A | -1.0069 | |
| 17 | S | A | -0.5340 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7552 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9508 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6521 | |
| 24 | A | A | -1.2649 | |
| 25 | P | A | 0.0243 | |
| 26 | A | A | 0.4621 | |
| 27 | V | A | 1.0341 | |
| 28 | T | A | 0.7257 | |
| 29 | V | A | 1.3920 | |
| 30 | L | A | 2.5029 | |
| 31 | Y | A | 1.7771 | |
| 32 | Y | A | 0.0000 | |
| 33 | F | A | 0.5496 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.6031 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5117 | |
| 39 | T | A | -1.2841 | |
| 40 | G | A | -1.3141 | |
| 41 | H | A | -1.5523 | |
| 42 | G | A | -0.9893 | |
| 43 | S | A | -0.6596 | |
| 44 | A | A | -0.2177 | |
| 45 | Y | A | -0.0222 | |
| 46 | Q | A | -1.2797 | |
| 47 | E | A | -1.6823 | |
| 48 | F | A | -0.3053 | |
| 49 | A | A | 0.2202 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.0337 | |
| 52 | G | A | 0.2404 | |
| 53 | S | A | -0.7367 | |
| 54 | K | A | -1.9875 | |
| 55 | S | A | -1.3694 | |
| 56 | T | A | -0.7620 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2431 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6604 | |
| 61 | G | A | -1.0267 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3520 | |
| 64 | P | A | -1.6542 | |
| 65 | G | A | -1.4397 | |
| 66 | V | A | -1.3759 | |
| 67 | D | A | -2.0849 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7763 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1896 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.8675 | |
| 74 | A | A | 0.0000 | |
| 75 | L | A | 2.0686 | |
| 76 | W | A | 1.7547 | |
| 77 | Y | A | 1.3827 | |
| 78 | K | A | -0.6096 | |
| 79 | G | A | 0.7333 | |
| 80 | I | A | 2.2899 | |
| 81 | T | A | 0.0000 | |
| 82 | S | A | 0.3465 | |
| 83 | P | A | 0.2215 | |
| 84 | I | A | -0.0227 | |
| 85 | S | A | -0.5871 | |
| 86 | I | A | -0.7130 | |
| 87 | N | A | -1.6886 | |
| 88 | Y | A | -1.4041 | |
| 89 | R | A | -2.4863 | |
| 90 | T | A | -1.4986 |