Project name: 19293a10be77a5b [mutate: LG40B] [mutate: GS40B]

Status: done

Started: 2026-03-10 16:44:40
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Chain sequence(s) C: DARRKAEMLQNEAKTLLAQANSKLQLLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYSTCL
B: ENVERWQGQYEGLRGQDLGQAVLDAGHSVSTLEKTLPQLGAKLSILENRGVHNASLALSASIGRVRELCAQARGAASKVKV
D: DTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKCIRNLEDIRKTLPSGCFNTPSIEKP
input PDB
Selected Chain(s) B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues GS40B
Energy difference between WT (input) and mutated protein (by FoldX) -0.652792 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       FoldX:    Building mutant model                                                       (00:04:03)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:04:08)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:08:08)
Show buried residues

Minimal score value
-4.2237
Maximal score value
1.7673
Average score
-1.4969
Total score value
-353.2708

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E B -2.8729
2 N B -2.3170
3 V B -0.8212
4 E B -2.9636
5 R B -3.2710
6 W B -1.2774
7 Q B -1.8822
8 G B -2.4965
9 Q B -2.0969
10 Y B -1.6877
11 E B -2.8716
12 G B -2.0248
13 L B -1.1621
14 R B -2.9472
15 G B -2.9510
16 Q B -2.5089
17 D B -2.5556
18 L B -2.5133
19 G B -1.6158
20 Q B -1.5568
21 A B 0.0000
22 V B 0.0000
23 L B 0.0468
24 D B -1.0103
25 A B 0.0000
26 G B -1.0355
27 H B -1.2921
28 S B -1.3791
29 V B 0.0000
30 S B -1.5296
31 T B -1.7188
32 L B 0.0000
33 E B -3.1257
34 K B -2.8500
35 T B -1.8869
36 L B 0.0000
37 P B -1.6933
38 Q B -1.6227
39 L B 0.0000
40 S B -0.4592 mutated: GS40B
41 A B -0.1672
42 K B -0.4721
43 L B 0.0000
44 S B -0.4222
45 I B 0.5598
46 L B 0.0000
47 E B -2.0213
48 N B -1.5261
49 R B -0.9054
50 G B -0.4797
51 V B 0.8582
52 H B 0.0587
53 N B -0.5641
54 A B 0.0000
55 S B 0.4189
56 L B 1.2990
57 A B 0.3360
58 L B 0.0000
59 S B -0.0531
60 A B -0.0386
61 S B -0.6825
62 I B 0.0000
63 G B -1.8903
64 R B -2.3694
65 V B 0.0000
66 R B -2.8527
67 E B -3.2156
68 L B 0.0000
69 C B 0.0000
70 A B -1.8918
71 Q B -2.0347
72 A B 0.0000
73 R B -2.1981
74 G B -1.5607
75 A B -1.6861
76 A B 0.0000
77 S B -1.6091
78 K B -2.2208
79 V B 0.0000
80 K B -1.2967
81 V B 0.6479
1 D C -2.6101
2 A C -2.3875
3 R C -3.2139
4 R C -3.2931
5 K C -2.4856
6 A C 0.0000
7 E C -2.8067
8 M C -1.8869
9 L C 0.0000
10 Q C -2.1849
11 N C -2.3679
12 E C -2.2159
13 A C 0.0000
14 K C -2.2809
15 T C -1.5702
16 L C -1.2206
17 L C -1.5540
18 A C -1.1714
19 Q C -1.6098
20 A C 0.0000
21 N C -1.6373
22 S C -1.4867
23 K C -1.7507
24 L C -1.5971
25 Q C -2.0924
26 L C -1.3423
27 L C 0.0000
28 K C -2.3669
29 D C -2.5643
30 L C 0.0000
31 E C -2.6227
32 R C -3.8130
33 K C -3.4888
34 Y C -2.9003
35 E C -3.5684
36 D C -3.6733
37 N C 0.0000
38 Q C -2.4860
39 R C -3.1098
40 Y C -1.9276
41 L C 0.0000
42 E C -2.6695
43 D C -3.0287
44 K C -2.3135
45 A C -1.8714
46 Q C -2.7642
47 E C -2.5641
48 L C 0.0000
49 A C -1.9529
50 R C -2.7486
51 L C -1.7784
52 E C 0.0000
53 G C -2.0546
54 E C -2.4251
55 V C 0.0000
56 R C -2.3911
57 S C -2.0254
58 L C 0.0000
59 L C -2.3848
60 K C -2.9972
61 D C -2.6915
62 I C 0.0000
63 S C -2.0906
64 Q C -1.9943
65 K C -1.5059
66 V C 0.0000
67 A C -0.3977
68 V C 0.9034
69 Y C 0.6714
70 S C 0.3115
71 T C 0.8508
72 C C 1.4475
73 L C 1.7673
1 D D -1.5056
2 T D -0.4506
3 V D 0.5063
4 D D -0.9940
5 L D -1.3286
6 N D -2.2111
7 K D -2.1121
8 L D 0.0000
9 N D -3.0968
10 E D -3.3580
11 I D 0.0000
12 E D -2.4814
13 G D -2.1320
14 T D -2.2281
15 L D 0.0000
16 N D -2.7216
17 K D -3.6573
18 A D 0.0000
19 K D -2.9445
20 D D -3.6360
21 E D -3.3284
22 M D 0.0000
23 K D -3.1026
24 V D -0.7079
25 S D -1.8539
26 D D -3.1733
27 L D 0.0000
28 D D -3.9949
29 R D -4.1874
30 K D -3.7438
31 V D 0.0000
32 S D -3.1474
33 D D -4.2237
34 L D 0.0000
35 E D -3.7101
36 N D -3.9177
37 E D -3.9387
38 A D 0.0000
39 K D -4.1002
40 K D -3.6787
41 Q D -2.7840
42 E D -2.4525
43 A D -1.8276
44 A D -1.6353
45 I D 0.0000
46 M D -1.2287
47 D D -2.6173
48 Y D -2.0280
49 N D -2.3971
50 R D -3.6595
51 D D -3.2644
52 I D 0.0000
53 E D -3.8090
54 E D -3.6192
55 I D 0.0000
56 M D -2.1413
57 K D -2.9149
58 C D -2.3573
59 I D 0.0000
60 R D -2.8270
61 N D -2.6299
62 L D 0.0000
63 E D -2.8428
64 D D -3.2124
65 I D -2.0149
66 R D -2.6258
67 K D -2.7121
68 T D -1.2448
69 L D 0.0000
70 P D 0.0519
71 S D -0.1990
72 G D 0.3147
73 C D 1.4346
74 F D 1.7618
75 N D 0.1275
76 T D 0.3351
77 P D 0.1095
78 S D -0.3981
79 I D 0.3595
80 E D -1.8240
81 K D -2.1228
82 P D -1.3013
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Laboratory of Theory of Biopolymers 2018