Project name: query_structure

Status: done

Started: 2026-03-16 22:59:47
Settings
Chain sequence(s) A: CIPRGGICLVALSGCCNSPGCIFGICA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:03)
Show buried residues

Minimal score value
-2.0117
Maximal score value
3.7147
Average score
0.8144
Total score value
21.9879

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.9383
2 I A 0.3530
3 P A -0.8369
4 R A -2.0117
5 G A -0.7499
6 G A 0.3907
7 I A 2.1240
8 C A 0.0000
9 L A 3.3175
10 V A 3.7147
11 A A 2.2134
12 L A 1.9693
13 S A 0.8037
14 G A 0.2816
15 C A 0.2423
16 C A 0.0736
17 N A -1.3094
18 S A -1.1917
19 P A -0.6254
20 G A -0.3038
21 C A 1.6221
22 I A 3.1556
23 F A 3.6952
24 G A 2.3350
25 I A 1.8735
26 C A 0.0000
27 A A -0.0868
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Laboratory of Theory of Biopolymers 2018