| Chain sequence(s) |
A: GTIFDCGESCFLGTCYTAGCSCGNWGLCYGTNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.0361 | |
| 2 | T | A | -0.0080 | |
| 3 | I | A | 1.0752 | |
| 4 | F | A | 1.2273 | |
| 5 | D | A | -1.0505 | |
| 6 | C | A | -0.0750 | |
| 7 | G | A | -0.1366 | |
| 8 | E | A | 0.1392 | |
| 9 | S | A | 1.0010 | |
| 10 | C | A | 0.0000 | |
| 11 | F | A | 2.6514 | |
| 12 | L | A | 2.3620 | |
| 13 | G | A | 0.8851 | |
| 14 | T | A | 1.0091 | |
| 15 | C | A | 1.1062 | |
| 16 | Y | A | 1.2464 | |
| 17 | T | A | 0.3033 | |
| 18 | A | A | 0.0610 | |
| 19 | G | A | -0.8181 | |
| 20 | C | A | -0.2163 | |
| 21 | S | A | 0.2568 | |
| 22 | C | A | 1.0068 | |
| 23 | G | A | 0.4118 | |
| 24 | N | A | -0.3796 | |
| 25 | W | A | 1.0737 | |
| 26 | G | A | 1.3920 | |
| 27 | L | A | 1.5479 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | 0.5528 | |
| 30 | G | A | 0.0000 | |
| 31 | T | A | -1.0955 | |
| 32 | N | A | -1.9924 | |
| 33 | G | A | -1.2664 |