Project name: Bruna

Status: done

Started: 2025-07-18 14:43:45
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Chain sequence(s) A: MGGFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:25)
Show buried residues

Minimal score value
-3.3057
Maximal score value
1.9649
Average score
-0.6887
Total score value
-55.7839

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.9498
2 G A 0.2298
3 G A 0.0218
4 F A 1.0531
5 G A -0.7085
6 N A -1.8118
7 Q A -1.7533
8 G A -1.2673
9 G A -0.8220
10 F A 0.7057
11 G A -0.7228
12 N A -1.8970
13 S A -1.9711
14 R A -2.8565
15 G A -2.0752
16 G A -1.4590
17 G A -1.2141
18 A A -0.4749
19 G A -0.5625
20 L A 0.5365
21 G A -1.0075
22 N A -2.3816
23 N A -2.6243
24 Q A -2.7963
25 G A -1.9888
26 S A -1.5633
27 N A -1.3869
28 M A -0.1369
29 G A -0.5098
30 G A -0.7397
31 G A -0.1735
32 M A 0.8198
33 N A 0.4691
34 F A 1.7492
35 G A 1.0016
36 A A 1.4640
37 F A 1.9649
38 S A 0.4974
39 I A 1.2132
40 N A -0.1386
41 P A 0.0198
42 A A 0.2572
43 M A 0.8735
44 M A 0.9243
45 A A 0.3713
46 A A 0.1832
47 A A 0.0782
48 Q A -0.8124
49 A A -0.3521
50 A A -0.1351
51 L A 0.0517
52 Q A -0.7469
53 S A -0.1958
54 S A 0.4585
55 W A 1.2784
56 G A 0.6392
57 M A 1.3598
58 M A 1.3929
59 G A 0.6450
60 M A 0.7848
61 L A 0.4259
62 A A -0.4951
63 S A -1.0890
64 Q A -1.8999
65 Q A -2.0306
66 N A -2.5531
67 Q A -2.6869
68 S A -2.3333
69 G A -2.2026
70 P A -1.4913
71 S A -1.2843
72 G A -2.1994
73 N A -2.8616
74 N A -3.3057
75 Q A -3.2410
76 N A -3.1615
77 Q A -2.6660
78 G A -2.1984
79 N A -1.5565
80 M A -0.4640
81 Q A -1.1978
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Laboratory of Theory of Biopolymers 2018