Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTNYWMNWMKQAPGQGLEWIGGIYLNGDSTDYNEKFKGKVTMTVDTSTSTVYMELSSLRSEDTAVYYCTRRGDYFGDFWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCKASQNVGKYVAWYQQKPGKAPKSLIYSASNRYDGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQYISYPLTFGAGTKLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:47) [INFO] Main: Simulation completed successfully. (00:02:49) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5052 | |
2 | V | H | -0.8322 | |
3 | Q | H | -1.0733 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.7979 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.3699 | |
8 | G | H | -0.3860 | |
9 | A | H | 0.3010 | |
11 | E | H | 0.2274 | |
12 | V | H | 1.0752 | |
13 | K | H | -0.8940 | |
14 | K | H | -2.1712 | |
15 | P | H | -2.0673 | |
16 | G | H | -1.6198 | |
17 | A | H | -1.1023 | |
18 | S | H | -1.5405 | |
19 | V | H | 0.0000 | |
20 | K | H | -2.2983 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.5267 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.4350 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7299 | |
27 | G | H | -1.0429 | |
28 | Y | H | -0.5478 | |
29 | T | H | -0.3747 | |
30 | F | H | 0.0000 | |
35 | T | H | -1.1656 | |
36 | N | H | -1.6099 | |
37 | Y | H | -0.7142 | |
38 | W | H | -0.5463 | |
39 | M | H | 0.0000 | |
40 | N | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | M | H | 0.0000 | |
43 | K | H | -0.5128 | |
44 | Q | H | -0.6832 | |
45 | A | H | -1.0155 | |
46 | P | H | -1.0336 | |
47 | G | H | -1.2419 | |
48 | Q | H | -1.7301 | |
49 | G | H | -1.1173 | |
50 | L | H | 0.0000 | |
51 | E | H | -1.3536 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | G | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | Y | H | -0.7690 | |
58 | L | H | 0.0000 | |
59 | N | H | -2.1268 | |
62 | G | H | -1.9382 | |
63 | D | H | -2.2045 | |
64 | S | H | -1.2503 | |
65 | T | H | -0.6544 | |
66 | D | H | -0.8404 | |
67 | Y | H | -1.1850 | |
68 | N | H | -2.1404 | |
69 | E | H | -3.4483 | |
70 | K | H | -3.2367 | |
71 | F | H | 0.0000 | |
72 | K | H | -3.0828 | |
74 | G | H | -2.0219 | |
75 | K | H | -1.8471 | |
76 | V | H | 0.0000 | |
77 | T | H | -1.1117 | |
78 | M | H | 0.0000 | |
79 | T | H | -0.5442 | |
80 | V | H | -0.1218 | |
81 | D | H | -0.2751 | |
82 | T | H | -0.5715 | |
83 | S | H | -0.3235 | |
84 | T | H | -0.3925 | |
85 | S | H | -0.4173 | |
86 | T | H | 0.0000 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.6130 | |
89 | M | H | 0.0000 | |
90 | E | H | -2.0721 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.2961 | |
93 | S | H | -1.3721 | |
94 | L | H | 0.0000 | |
95 | R | H | -3.0951 | |
96 | S | H | -2.3605 | |
97 | E | H | -2.5559 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.7402 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.2723 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | T | H | -0.2540 | |
106 | R | H | -0.4246 | |
107 | R | H | -0.4055 | |
108 | G | H | 0.0000 | |
109 | D | H | -0.8408 | |
113 | Y | H | 1.1271 | |
114 | F | H | 0.6447 | |
115 | G | H | -0.0973 | |
116 | D | H | -0.4303 | |
117 | F | H | -0.2041 | |
118 | W | H | -0.2882 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.2164 | |
121 | G | H | -0.5096 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.8970 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0800 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9424 | |
128 | S | H | -0.9049 | |
1 | D | L | -2.2665 | |
2 | I | L | -1.6904 | |
3 | Q | L | -2.0275 | |
4 | M | L | 0.0000 | |
5 | T | L | -1.0266 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.4882 | |
8 | P | L | -0.4829 | |
9 | S | L | -0.6780 | |
10 | S | L | -0.9015 | |
11 | L | L | -0.3372 | |
12 | S | L | -0.4834 | |
13 | A | L | 0.0000 | |
14 | S | L | 0.0415 | |
15 | V | L | 0.8579 | |
16 | G | L | -0.3743 | |
17 | D | L | -1.3378 | |
18 | R | L | -2.0802 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.5549 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.6786 | |
23 | C | L | 0.0000 | |
24 | K | L | -2.3508 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.9902 | |
27 | Q | L | -2.5931 | |
28 | N | L | -2.1594 | |
29 | V | L | 0.0000 | |
36 | G | L | -0.9681 | |
37 | K | L | -0.7559 | |
38 | Y | L | 0.8755 | |
39 | V | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.7610 | |
46 | P | L | -1.3148 | |
47 | G | L | -1.6244 | |
48 | K | L | -2.5540 | |
49 | A | L | -1.5969 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.5205 | |
52 | S | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.1604 | |
56 | S | L | 0.0000 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.8715 | |
66 | N | L | -1.3534 | |
67 | R | L | -1.4737 | |
68 | Y | L | -1.2968 | |
69 | D | L | -2.1310 | |
70 | G | L | -1.3276 | |
71 | V | L | -0.9671 | |
72 | P | L | -0.6357 | |
74 | S | L | -0.5425 | |
75 | R | L | -0.6941 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.6572 | |
78 | G | L | -0.6153 | |
79 | S | L | -0.7684 | |
80 | G | L | -1.0529 | |
83 | S | L | -1.2944 | |
84 | G | L | -1.6593 | |
85 | T | L | -2.0332 | |
86 | D | L | -2.1565 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.6345 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.5436 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.1229 | |
93 | S | L | -0.9956 | |
94 | L | L | 0.0000 | |
95 | Q | L | -0.9216 | |
96 | P | L | -0.6330 | |
97 | E | L | -1.8669 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.3341 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.8634 | |
102 | Y | L | 0.0000 | |
103 | F | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 1.2841 | |
108 | I | L | 1.5118 | |
109 | S | L | 0.6570 | |
114 | Y | L | 0.1523 | |
115 | P | L | -0.7806 | |
116 | L | L | 0.0000 | |
117 | T | L | -0.5042 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | A | L | -0.6659 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.6480 | |
124 | L | L | 0.0000 | |
125 | E | L | -0.4728 | |
126 | I | L | 1.1105 | |
127 | K | L | -0.7286 |