Project name: 2ba40e3c8a874e1

Status: done

Started: 2025-06-03 05:06:51
Settings
Chain sequence(s) H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTNYWMNWMKQAPGQGLEWIGGIYLNGDSTDYNEKFKGKVTMTVDTSTSTVYMELSSLRSEDTAVYYCTRRGDYFGDFWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCKASQNVGKYVAWYQQKPGKAPKSLIYSASNRYDGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQYISYPLTFGAGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:49)
Show buried residues

Minimal score value
-3.4483
Maximal score value
1.5118
Average score
-0.6353
Total score value
-142.2973

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5052
2 V H -0.8322
3 Q H -1.0733
4 L H 0.0000
5 V H 0.7979
6 Q H 0.0000
7 S H -0.3699
8 G H -0.3860
9 A H 0.3010
11 E H 0.2274
12 V H 1.0752
13 K H -0.8940
14 K H -2.1712
15 P H -2.0673
16 G H -1.6198
17 A H -1.1023
18 S H -1.5405
19 V H 0.0000
20 K H -2.2983
21 V H 0.0000
22 S H -0.5267
23 C H 0.0000
24 K H -0.4350
25 A H 0.0000
26 S H -0.7299
27 G H -1.0429
28 Y H -0.5478
29 T H -0.3747
30 F H 0.0000
35 T H -1.1656
36 N H -1.6099
37 Y H -0.7142
38 W H -0.5463
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 M H 0.0000
43 K H -0.5128
44 Q H -0.6832
45 A H -1.0155
46 P H -1.0336
47 G H -1.2419
48 Q H -1.7301
49 G H -1.1173
50 L H 0.0000
51 E H -1.3536
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 G H 0.0000
56 I H 0.0000
57 Y H -0.7690
58 L H 0.0000
59 N H -2.1268
62 G H -1.9382
63 D H -2.2045
64 S H -1.2503
65 T H -0.6544
66 D H -0.8404
67 Y H -1.1850
68 N H -2.1404
69 E H -3.4483
70 K H -3.2367
71 F H 0.0000
72 K H -3.0828
74 G H -2.0219
75 K H -1.8471
76 V H 0.0000
77 T H -1.1117
78 M H 0.0000
79 T H -0.5442
80 V H -0.1218
81 D H -0.2751
82 T H -0.5715
83 S H -0.3235
84 T H -0.3925
85 S H -0.4173
86 T H 0.0000
87 V H 0.0000
88 Y H -0.6130
89 M H 0.0000
90 E H -2.0721
91 L H 0.0000
92 S H -1.2961
93 S H -1.3721
94 L H 0.0000
95 R H -3.0951
96 S H -2.3605
97 E H -2.5559
98 D H 0.0000
99 T H -0.7402
100 A H 0.0000
101 V H 0.2723
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 T H -0.2540
106 R H -0.4246
107 R H -0.4055
108 G H 0.0000
109 D H -0.8408
113 Y H 1.1271
114 F H 0.6447
115 G H -0.0973
116 D H -0.4303
117 F H -0.2041
118 W H -0.2882
119 G H 0.0000
120 Q H -1.2164
121 G H -0.5096
122 T H 0.0000
123 L H 0.8970
124 V H 0.0000
125 T H -0.0800
126 V H 0.0000
127 S H -0.9424
128 S H -0.9049
1 D L -2.2665
2 I L -1.6904
3 Q L -2.0275
4 M L 0.0000
5 T L -1.0266
6 Q L 0.0000
7 S L -0.4882
8 P L -0.4829
9 S L -0.6780
10 S L -0.9015
11 L L -0.3372
12 S L -0.4834
13 A L 0.0000
14 S L 0.0415
15 V L 0.8579
16 G L -0.3743
17 D L -1.3378
18 R L -2.0802
19 V L 0.0000
20 T L -0.5549
21 I L 0.0000
22 T L -0.6786
23 C L 0.0000
24 K L -2.3508
25 A L 0.0000
26 S L -1.9902
27 Q L -2.5931
28 N L -2.1594
29 V L 0.0000
36 G L -0.9681
37 K L -0.7559
38 Y L 0.8755
39 V L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.7610
46 P L -1.3148
47 G L -1.6244
48 K L -2.5540
49 A L -1.5969
50 P L 0.0000
51 K L -1.5205
52 S L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1604
56 S L 0.0000
57 A L 0.0000
65 S L -0.8715
66 N L -1.3534
67 R L -1.4737
68 Y L -1.2968
69 D L -2.1310
70 G L -1.3276
71 V L -0.9671
72 P L -0.6357
74 S L -0.5425
75 R L -0.6941
76 F L 0.0000
77 S L -0.6572
78 G L -0.6153
79 S L -0.7684
80 G L -1.0529
83 S L -1.2944
84 G L -1.6593
85 T L -2.0332
86 D L -2.1565
87 F L 0.0000
88 T L -0.6345
89 L L 0.0000
90 T L -0.5436
91 I L 0.0000
92 S L -1.1229
93 S L -0.9956
94 L L 0.0000
95 Q L -0.9216
96 P L -0.6330
97 E L -1.8669
98 D L 0.0000
99 F L -0.3341
100 A L 0.0000
101 T L -0.8634
102 Y L 0.0000
103 F L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 1.2841
108 I L 1.5118
109 S L 0.6570
114 Y L 0.1523
115 P L -0.7806
116 L L 0.0000
117 T L -0.5042
118 F L 0.0000
119 G L 0.0000
120 A L -0.6659
121 G L 0.0000
122 T L 0.0000
123 K L -1.6480
124 L L 0.0000
125 E L -0.4728
126 I L 1.1105
127 K L -0.7286
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Laboratory of Theory of Biopolymers 2018