Project name: 1_rank

Status: done

Started: 2026-04-28 13:57:11
Settings
Chain sequence(s) B: MIDVSKFSIQERQVLVYEIMREVEENPHDPRLKGVSWYMLDRMMMYPEDEENIKRLEELLNG
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:31)
Show buried residues

Minimal score value
-3.7446
Maximal score value
1.0322
Average score
-1.1527
Total score value
-71.4655

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M B 0.9346
2 I B 0.1165
3 D B -1.3838
4 V B 0.0000
5 S B -1.8601
6 K B -1.8438
7 F B -1.1459
8 S B -1.0188
9 I B -0.4067
10 Q B -1.3659
11 E B -1.2262
12 R B -0.6167
13 Q B -0.0088
14 V B 0.7923
15 L B 0.6179
16 V B 0.0000
17 Y B 0.8631
18 E B 0.1160
19 I B 0.0000
20 M B -0.5223
21 R B -1.9110
22 E B -2.5208
23 V B -2.6068
24 E B -3.5065
25 E B -3.7446
26 N B -3.3161
27 P B -2.6469
28 H B -2.6445
29 D B 0.0000
30 P B -2.2079
31 R B -2.9468
32 L B -2.3424
33 K B -2.6693
34 G B -1.4806
35 V B -0.3069
36 S B 0.3698
37 W B 0.9564
38 Y B 1.0322
39 M B 0.1104
40 L B 0.0000
41 D B -0.7597
42 R B -0.5612
43 M B 0.0000
44 M B 0.4208
45 M B 0.5164
46 Y B 0.2274
47 P B 0.0000
48 E B -2.2645
49 D B -2.9715
50 E B -3.7342
51 E B -3.4972
52 N B 0.0000
53 I B -3.0243
54 K B -3.6986
55 R B -2.7000
56 L B 0.0000
57 E B -2.2267
58 E B -2.9090
59 L B 0.0000
60 L B -0.9286
61 N B -1.1681
62 G B -1.8456
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Laboratory of Theory of Biopolymers 2018