Project name: 2bd8a6cc27d4342

Status: done

Started: 2025-10-27 04:26:35
Settings
Chain sequence(s) A: DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECQVQLKESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSSASTTPPSVFPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC
B: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:17)
Show buried residues

Minimal score value
-3.9575
Maximal score value
1.3659
Average score
-0.701
Total score value
-393.2874

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.9948
2 I A -1.3020
3 Q A -1.8540
4 M A 0.0000
5 T A -1.3128
6 Q A -0.9853
7 S A -0.6507
8 P A -0.3609
9 A A -0.3636
10 S A -0.3685
11 L A -0.2219
12 S A -0.6477
13 A A 0.0000
14 S A -0.1445
15 V A 0.6174
16 G A -0.5072
17 E A -1.0898
18 T A -1.1412
19 V A 0.0000
20 T A -0.7291
21 I A 0.0000
22 T A -0.9512
23 C A 0.0000
24 R A -2.6050
25 A A 0.0000
26 S A -1.5841
27 G A -1.5512
28 N A -1.8337
29 I A 0.0000
30 H A -1.1078
31 N A -0.8743
32 Y A 0.0000
33 L A 0.0000
34 A A 0.0000
35 W A 0.0000
36 Y A 0.0000
37 Q A 0.0000
38 Q A 0.0000
39 K A -2.0120
40 Q A -2.2698
41 G A -1.9906
42 K A -2.7732
43 S A -1.6284
44 P A 0.0000
45 Q A -1.0690
46 L A 0.0000
47 L A 0.0000
48 V A 0.0000
49 Y A 0.2403
50 Y A -0.0446
51 T A 0.0000
52 T A -0.0509
53 T A 0.0552
54 L A 0.0816
55 A A -0.7863
56 D A -1.8756
57 G A -1.1908
58 V A -0.6220
59 P A -0.5202
60 S A -0.5394
61 R A -1.1128
62 F A 0.0000
63 S A -0.9421
64 G A -0.5430
65 S A -0.8030
66 G A -0.9972
67 S A -1.2068
68 G A -1.4054
69 T A -1.7753
70 Q A -2.0557
71 Y A 0.0000
72 S A -1.0210
73 L A 0.0000
74 K A -1.5813
75 I A 0.0000
76 N A -1.7865
77 S A -1.0188
78 L A 0.0000
79 Q A -0.9175
80 P A -0.7709
81 E A -1.6685
82 D A 0.0000
83 F A 0.0000
84 G A 0.0000
85 S A -0.5847
86 Y A 0.0000
87 Y A 0.0000
88 C A 0.0000
89 Q A 0.0000
90 H A 0.0000
91 F A 0.0000
92 W A -0.3957
93 S A -0.3109
94 T A -0.4740
95 P A -0.5456
96 R A 0.0000
97 T A -0.6606
98 F A 0.0000
99 G A 0.0000
100 G A -0.9785
101 G A -0.8010
102 T A 0.0000
103 K A -0.5939
104 L A 0.0000
105 E A -0.6893
106 I A -0.3509
107 K A -1.3063
108 R A -1.4023
109 A A -0.7645
110 D A -1.2914
111 A A -0.7743
112 A A -0.4057
113 P A 0.0000
114 T A -0.0782
115 V A 0.0000
116 S A 0.0652
117 I A 0.1571
118 F A 0.0000
119 P A -0.0785
120 P A 0.0000
121 S A 0.0000
122 S A -0.7175
123 E A -1.1610
124 Q A 0.0000
125 L A -0.8225
126 T A -0.6954
127 S A -0.7273
128 G A -1.1030
129 G A -0.9769
130 A A 0.0000
131 S A 0.0000
132 V A 0.0000
133 V A 0.0000
134 C A 0.0000
135 F A 0.0000
136 L A 0.0000
137 N A 0.0000
138 N A -1.0367
139 F A 0.0000
140 Y A 0.0000
141 P A -1.7627
142 K A -2.0671
143 D A -2.6719
144 I A -1.8243
145 N A -1.9298
146 V A 0.0000
147 K A -1.1860
148 W A 0.0000
149 K A -1.9719
150 I A 0.0000
151 D A -2.0126
152 G A -1.7339
153 S A -1.8089
154 E A -3.0431
155 R A -2.5416
156 Q A -2.4227
157 N A -2.1164
158 G A -1.0474
159 V A -0.5271
160 L A -0.1490
161 N A -0.0061
162 S A 0.0000
163 W A 0.1785
164 T A -0.5821
165 D A -1.6170
166 Q A -1.6044
167 D A -1.9829
168 S A -1.7521
169 K A -2.6666
170 D A -2.3107
171 S A -1.9556
172 T A 0.0000
173 Y A 0.0000
174 S A 0.0000
175 M A 0.0000
176 S A 0.0000
177 S A 0.0000
178 T A 0.0000
179 L A 0.0000
180 T A -0.2613
181 L A 0.0000
182 T A -1.7464
183 K A -2.6712
184 D A -3.5285
185 E A -3.0653
186 Y A 0.0000
187 E A -3.9575
188 R A -3.7891
189 H A -2.7625
190 N A -2.7112
191 S A -1.7862
192 Y A 0.0000
193 T A -0.5847
194 C A 0.0000
195 E A -0.1764
196 A A 0.0000
197 T A -0.8599
198 H A 0.0000
199 K A -2.4582
200 T A -1.0948
201 S A -0.6628
202 T A -0.4826
203 S A -0.1948
204 P A -0.0388
205 I A 0.9470
206 V A 1.3659
207 K A 0.1701
208 S A -0.2288
209 F A -0.9237
210 N A -1.8762
211 R A -2.5609
212 N A -2.4541
213 E A -2.4144
214 C A -1.1269
215 Q A -1.5051
216 V A -0.9309
217 Q A -1.8761
218 L A 0.0000
219 K A -2.4256
220 E A 0.0000
221 S A -0.8107
222 G A -0.3569
223 P A -0.1523
224 G A 0.0916
225 L A 0.8309
226 V A 0.1957
227 A A -0.2947
228 P A -1.0724
229 S A -1.1296
230 Q A -1.5250
231 S A -1.1949
232 L A 0.0000
233 S A -0.5796
234 I A 0.0000
235 T A -0.3681
236 C A 0.0000
237 T A -1.2284
238 V A 0.0000
239 S A -1.3714
240 G A -1.0676
241 F A -0.5369
242 S A -1.0010
243 L A 0.0000
244 T A -1.0689
245 G A 0.0000
246 Y A -0.1303
247 G A 0.0000
248 V A 0.0000
249 N A 0.0000
250 W A 0.0000
251 V A 0.0000
252 R A 0.0000
253 Q A -1.1516
254 P A -1.5041
255 P A -1.1970
256 G A -1.4815
257 K A -2.2591
258 G A -1.4122
259 L A 0.0000
260 E A -0.8374
261 W A 0.0000
262 L A 0.0000
263 G A 0.0000
264 M A 0.0000
265 I A 0.0000
266 W A -0.6843
267 G A -0.8930
268 D A -1.1168
269 G A -1.2843
270 N A -1.6706
271 T A -0.8706
272 D A -0.7467
273 Y A -0.5288
274 N A -0.9134
275 S A -0.9550
276 A A -0.6007
277 L A -0.7066
278 K A -1.4999
279 S A -1.0189
280 R A -1.0222
281 L A 0.0000
282 S A -0.6387
283 I A 0.0000
284 S A -0.6507
285 K A -1.1094
286 D A -1.7752
287 N A -2.3216
288 S A -1.9154
289 K A -2.4972
290 S A -1.7953
291 Q A -1.4348
292 V A 0.0000
293 F A 0.2420
294 L A 0.0000
295 K A -0.9267
296 M A 0.0000
297 N A -1.2875
298 S A -1.1120
299 L A 0.0000
300 H A -1.5651
301 T A -1.3041
302 D A -2.0563
303 D A 0.0000
304 T A -0.8339
305 A A 0.0000
306 R A -0.9919
307 Y A 0.0000
308 Y A 0.0000
309 C A 0.0000
310 A A 0.0000
311 R A 0.0000
312 E A 0.0000
313 R A -0.4004
314 D A 0.0000
315 Y A 0.0000
316 R A 0.0000
317 L A 0.0000
318 D A -0.4052
319 Y A 0.2557
320 W A 0.0000
321 G A 0.0000
322 Q A -2.2526
323 G A -1.4794
324 T A -0.9316
325 T A -0.4166
326 L A 0.0000
327 T A -0.2136
328 V A 0.0000
329 S A -0.4131
330 S A -0.2931
331 A A -0.3599
332 S A -0.3729
333 T A -0.2965
334 T A -0.1990
335 P A -0.6324
336 P A 0.0000
337 S A -0.1987
338 V A 0.0000
339 F A -0.4532
340 P A -0.3784
341 L A 0.0000
342 A A 0.0000
343 P A -0.1720
344 G A -0.9261
345 S A -0.9065
346 A A -0.6190
347 A A -0.7830
348 Q A -1.4409
349 T A -1.1322
350 N A -1.5416
351 S A -0.7740
352 M A -0.1690
353 V A -0.2179
354 T A 0.0926
355 L A 0.0000
356 G A 0.0000
357 C A 0.0000
358 L A 0.0000
359 V A 0.0000
360 K A -0.2232
361 G A -0.2892
362 Y A 0.0000
363 F A 0.0000
364 P A -0.4122
365 E A -0.8689
366 P A -0.6603
367 V A -0.1268
368 T A -0.2304
369 V A -0.1934
370 T A -0.3662
371 W A 0.0000
372 N A -1.0441
373 S A -0.8277
374 G A -0.7640
375 S A -0.5870
376 L A -0.2783
377 S A -0.3919
378 S A -0.2787
379 G A -0.2515
380 V A 0.0980
381 H A -0.2317
382 T A 0.0037
383 F A 0.0000
384 P A -0.0453
385 A A 0.1480
386 V A 0.5459
387 L A 0.5187
388 Q A -0.6671
389 S A -0.6243
390 D A -0.6125
391 L A -0.1446
392 Y A 0.1211
393 T A 0.0000
394 L A 0.0000
395 S A 0.0000
396 S A 0.0000
397 S A 0.0000
398 V A 0.0000
399 T A 0.0950
400 V A 0.0000
401 P A -0.3903
402 S A -0.9548
403 S A -0.8214
404 P A -1.2137
405 R A -1.2080
406 P A -1.0267
407 S A -1.3978
408 E A -2.1688
409 T A -1.2222
410 V A 0.0000
411 T A -1.2383
412 C A 0.0000
413 N A -1.3189
414 V A 0.0000
415 A A -0.8996
416 H A 0.0000
417 P A -0.7340
418 A A -0.3867
419 S A -0.5344
420 S A -0.7512
421 T A -1.0062
422 K A -1.9946
423 V A -1.3572
424 D A -2.0016
425 K A -1.5121
426 K A -1.4447
427 I A 0.0000
428 V A 0.8022
429 P A -0.3199
430 R A -0.8698
431 D A -1.4068
432 C A -0.5095
1 K B -0.9326
2 V B 0.3180
3 F B 0.0000
4 G B -0.7554
5 R B -0.8902
6 C B -1.0289
7 E B -1.4130
8 L B 0.0000
9 A B 0.0000
10 A B -1.3686
11 A B -1.3906
12 M B 0.0000
13 K B -1.7357
14 R B -2.2790
15 H B -1.7214
16 G B -1.5122
17 L B 0.0000
18 D B -1.2662
19 N B -0.9363
20 Y B -0.8606
21 R B -1.5897
22 G B 0.0000
23 Y B 0.0000
24 S B 0.0000
25 L B 0.0000
26 G B 0.0000
27 N B 0.0000
28 W B 0.0000
29 V B 0.0000
30 C B 0.0000
31 A B 0.0000
32 A B 0.0000
33 K B -0.8761
34 F B -0.6654
35 E B -0.4815
36 S B 0.0000
37 N B -1.2347
38 F B 0.0000
39 N B -1.0131
40 T B 0.0000
41 Q B -1.5124
42 A B -1.2708
43 T B -1.5919
44 N B -2.6335
45 R B -3.1375
46 N B -2.4897
47 T B -1.7591
48 D B -2.2619
49 G B -1.8862
50 S B 0.0000
51 T B 0.0000
52 D B -1.4731
53 Y B 0.0000
54 G B 0.0000
55 I B 0.0000
56 L B 0.0000
57 Q B -0.7230
58 I B 0.0000
59 N B -0.6998
60 S B 0.0000
61 R B -1.0706
62 W B 0.0028
63 W B -0.1311
64 C B 0.0000
65 N B -1.6725
66 D B -1.6299
67 G B -1.8748
68 R B -2.4239
69 T B 0.0000
70 P B -1.5959
71 G B -1.3340
72 S B -1.5464
73 R B -1.7531
74 N B -1.0588
75 L B 0.0444
76 C B -0.6654
77 N B -1.1363
78 I B -0.6113
79 P B -0.8015
80 C B 0.0000
81 S B -0.5050
82 A B -0.2633
83 L B 0.0000
84 L B -0.7612
85 S B -0.9182
86 S B -1.1227
87 D B -1.4198
88 I B 0.0000
89 T B -1.0288
90 A B -0.6562
91 S B 0.0000
92 V B 0.0000
93 N B -1.7027
94 C B 0.0000
95 A B 0.0000
96 K B -1.7940
97 K B -1.8105
98 I B 0.0000
99 V B 0.0000
100 S B -1.9428
101 D B -2.6260
102 G B -1.8921
103 N B -2.1307
104 G B 0.0000
105 M B 0.0000
106 N B -1.1486
107 A B -0.4338
108 W B 0.0000
109 V B 0.8456
110 A B -0.6144
111 W B 0.0000
112 R B -2.0142
113 N B -2.4293
114 R B -2.7490
115 C B 0.0000
116 K B -2.3073
117 G B -1.3190
118 T B -0.8263
119 D B -0.7579
120 V B 0.0000
121 Q B 0.0000
122 A B -0.1803
123 W B -0.0870
124 I B -0.3520
125 R B -0.7495
126 G B -1.0173
127 C B 0.0000
128 R B -2.0038
129 L B -1.1765
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018