Chain sequence(s) |
H: QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVSFLWYDGTNKNYVESVKGRFTISRDNSKNMLYLEMNSLRAEDTAVYYCARDHDFRSGYEGWFDPWGQGTLVTVSS
L: EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHRSNWPPTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48) [INFO] Main: Simulation completed successfully. (00:01:50) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -0.9458 | |
2 | V | H | 0.0367 | |
3 | Q | H | -0.5091 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.4159 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.2031 | |
8 | G | H | -0.5105 | |
9 | G | H | 0.3562 | |
11 | G | H | 1.0143 | |
12 | V | H | 1.9308 | |
13 | V | H | 0.1755 | |
14 | Q | H | -1.0699 | |
15 | P | H | -1.9707 | |
16 | G | H | -2.0819 | |
17 | R | H | -2.6540 | |
18 | S | H | -1.7833 | |
19 | L | H | -0.8703 | |
20 | R | H | -1.3051 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.2505 | |
23 | C | H | 0.0000 | |
24 | A | H | -0.2388 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.4026 | |
27 | G | H | -0.4336 | |
28 | F | H | -0.0148 | |
29 | T | H | -0.1009 | |
30 | F | H | 0.0000 | |
35 | S | H | -0.4206 | |
36 | S | H | 0.0853 | |
37 | Y | H | 0.4394 | |
38 | G | H | 0.0000 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.6105 | |
45 | A | H | -1.0157 | |
46 | P | H | -0.9543 | |
47 | G | H | -1.4577 | |
48 | K | H | -2.2682 | |
49 | G | H | -1.3737 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.8150 | |
52 | W | H | 0.0000 | |
53 | V | H | 0.0000 | |
54 | S | H | 0.0000 | |
55 | F | H | 0.0000 | |
56 | L | H | 0.0000 | |
57 | W | H | 0.1238 | |
58 | Y | H | 0.6546 | |
59 | D | H | -0.3910 | |
62 | G | H | -0.5836 | |
63 | T | H | -0.5770 | |
64 | N | H | -1.0171 | |
65 | K | H | -1.5032 | |
66 | N | H | -1.1725 | |
67 | Y | H | -1.2506 | |
68 | V | H | -1.4421 | |
69 | E | H | -2.4157 | |
70 | S | H | -1.8887 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.6125 | |
74 | G | H | -1.7435 | |
75 | R | H | -1.6376 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.9979 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.4179 | |
80 | R | H | 0.0000 | |
81 | D | H | -1.4378 | |
82 | N | H | -1.6266 | |
83 | S | H | -1.5636 | |
84 | K | H | -2.3747 | |
85 | N | H | -1.8095 | |
86 | M | H | -0.9040 | |
87 | L | H | 0.0000 | |
88 | Y | H | -0.2450 | |
89 | L | H | 0.0000 | |
90 | E | H | -0.9073 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.9761 | |
93 | S | H | -1.8100 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.3675 | |
96 | A | H | -1.5222 | |
97 | E | H | -2.1908 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.2483 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.8166 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.3546 | |
107 | D | H | 0.0000 | |
108 | H | H | -0.0243 | |
109 | D | H | 0.2738 | |
110 | F | H | 1.0341 | |
111 | R | H | -0.5818 | |
111A | S | H | -0.5639 | |
112B | G | H | -0.3238 | |
112A | Y | H | 0.3525 | |
112 | E | H | 0.0000 | |
113 | G | H | 0.0000 | |
114 | W | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.6098 | |
117 | P | H | -0.4345 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.1615 | |
121 | G | H | -0.1771 | |
122 | T | H | 0.0000 | |
123 | L | H | 1.6988 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.6251 | |
126 | V | H | -0.4153 | |
127 | S | H | -0.0622 | |
128 | S | H | -0.1784 | |
1 | E | L | -1.4873 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.9210 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.3308 | |
6 | Q | L | -0.4619 | |
7 | S | L | -0.5724 | |
8 | P | L | -0.3797 | |
9 | A | L | -0.3453 | |
10 | T | L | -0.4051 | |
11 | L | L | -0.1005 | |
12 | S | L | -0.2062 | |
13 | L | L | -0.4941 | |
14 | S | L | -0.9669 | |
15 | P | L | -1.4173 | |
16 | G | L | -1.8754 | |
17 | E | L | -2.1421 | |
18 | R | L | -2.6359 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.6366 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.5789 | |
23 | C | L | 0.0000 | |
24 | R | L | -1.4484 | |
25 | A | L | 0.0000 | |
26 | S | L | -0.4666 | |
27 | Q | L | -0.9436 | |
28 | S | L | -0.9345 | |
29 | V | L | 0.0000 | |
36 | S | L | -0.5640 | |
37 | S | L | -0.4267 | |
38 | Y | L | -0.1165 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | -0.7756 | |
45 | K | L | -1.1614 | |
46 | P | L | -0.8391 | |
47 | G | L | -1.3564 | |
48 | Q | L | -1.9753 | |
49 | A | L | -1.3574 | |
50 | P | L | 0.0000 | |
51 | R | L | -1.2523 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.5413 | |
56 | D | L | -0.6441 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.9941 | |
66 | N | L | -1.4872 | |
67 | R | L | -1.4785 | |
68 | A | L | 0.0000 | |
69 | T | L | -0.6406 | |
70 | G | L | -0.6309 | |
71 | I | L | 0.0000 | |
72 | P | L | -0.5423 | |
74 | A | L | -0.3522 | |
75 | R | L | -0.9461 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.7100 | |
78 | G | L | -0.7309 | |
79 | S | L | -0.6883 | |
80 | G | L | -0.8452 | |
83 | S | L | -0.8731 | |
84 | G | L | -0.8734 | |
85 | T | L | -1.2145 | |
86 | D | L | -1.5431 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.5799 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.6300 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.4707 | |
93 | S | L | -1.9372 | |
94 | L | L | 0.0000 | |
95 | E | L | -2.7564 | |
96 | P | L | -1.7295 | |
97 | E | L | -2.3615 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.4318 | |
100 | A | L | 0.0000 | |
101 | V | L | 0.0177 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | H | L | 0.0000 | |
107 | R | L | -0.3283 | |
108 | S | L | -0.4906 | |
109 | N | L | -1.0273 | |
114 | W | L | -0.4564 | |
115 | P | L | -0.8399 | |
116 | P | L | 0.0000 | |
117 | T | L | -0.3894 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.6474 | |
121 | G | L | -0.7520 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.8291 | |
124 | V | L | 0.0000 | |
125 | E | L | 0.1313 | |
126 | I | L | 0.9295 | |
127 | K | L | -0.8954 |