| Chain sequence(s) |
A: KLVFFAE
C: KLVFFAE B: KLVFFAE D: KLVFFAE input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.1715 | |
| 2 | L | A | 1.9022 | |
| 3 | V | A | 4.4060 | |
| 4 | F | A | 4.5398 | |
| 5 | F | A | 3.7017 | |
| 6 | A | A | 0.8402 | |
| 7 | E | A | -1.5843 | |
| 1 | K | B | -1.2297 | |
| 2 | L | B | 1.9279 | |
| 3 | V | B | 3.7361 | |
| 4 | F | B | 4.0013 | |
| 5 | F | B | 3.2066 | |
| 6 | A | B | 0.4122 | |
| 7 | E | B | -1.7085 | |
| 1 | K | C | -1.4696 | |
| 2 | L | C | 1.6557 | |
| 3 | V | C | 3.8216 | |
| 4 | F | C | 4.0675 | |
| 5 | F | C | 3.5764 | |
| 6 | A | C | 0.7711 | |
| 7 | E | C | -1.4932 | |
| 1 | K | D | -1.7554 | |
| 2 | L | D | 1.5459 | |
| 3 | V | D | 4.0336 | |
| 4 | F | D | 4.4125 | |
| 5 | F | D | 4.3828 | |
| 6 | A | D | 1.3657 | |
| 7 | E | D | -0.7800 |