| Chain sequence(s) |
H: EVQLVESGGGLVQAGGSLRLSCTASGITASYYDMGWYRQAPGKQREVVAIITAGGGITDYADSVKGRFTISRDIAKNTVYLHVNSLKPEDTAVYYCNLRSSKLFWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1017 | |
| 2 | V | H | -1.1322 | |
| 3 | Q | H | -1.1986 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0998 | |
| 6 | E | H | 0.1936 | |
| 7 | S | H | -0.4789 | |
| 8 | G | H | -1.0052 | |
| 9 | G | H | -0.5234 | |
| 11 | G | H | 0.1551 | |
| 12 | L | H | 1.1631 | |
| 13 | V | H | 0.0670 | |
| 14 | Q | H | -1.2764 | |
| 15 | A | H | -1.7672 | |
| 16 | G | H | -1.5372 | |
| 17 | G | H | -1.0865 | |
| 18 | S | H | -1.2655 | |
| 19 | L | H | -0.7512 | |
| 20 | R | H | -1.5472 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2433 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.3588 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0302 | |
| 27 | G | H | -1.3004 | |
| 28 | I | H | -0.3959 | |
| 29 | T | H | 0.1498 | |
| 30 | A | H | 0.3461 | |
| 35 | S | H | 0.5489 | |
| 36 | Y | H | 1.1777 | |
| 37 | Y | H | 0.3589 | |
| 38 | D | H | -0.2585 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.3846 | |
| 45 | A | H | -1.4573 | |
| 46 | P | H | -1.1298 | |
| 47 | G | H | -1.6202 | |
| 48 | K | H | -2.5683 | |
| 49 | Q | H | -2.5404 | |
| 50 | R | H | -1.7757 | |
| 51 | E | H | -1.0741 | |
| 52 | V | H | 0.2239 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | I | H | 0.2534 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | 0.2716 | |
| 58 | A | H | 0.5214 | |
| 59 | G | H | -0.1020 | |
| 62 | G | H | 0.0259 | |
| 63 | G | H | 0.2534 | |
| 64 | I | H | 1.3403 | |
| 65 | T | H | 0.1676 | |
| 66 | D | H | -1.3086 | |
| 67 | Y | H | -1.4075 | |
| 68 | A | H | -1.4250 | |
| 69 | D | H | -2.6424 | |
| 70 | S | H | -1.7601 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.7047 | |
| 74 | G | H | -1.8084 | |
| 75 | R | H | -1.8543 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -1.0588 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1351 | |
| 80 | R | H | -1.0288 | |
| 81 | D | H | -1.5783 | |
| 82 | I | H | -0.5242 | |
| 83 | A | H | -0.8340 | |
| 84 | K | H | -2.0508 | |
| 85 | N | H | -1.4367 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.5637 | |
| 89 | L | H | 0.0000 | |
| 90 | H | H | -1.2975 | |
| 91 | V | H | 0.0000 | |
| 92 | N | H | -2.1591 | |
| 93 | S | H | -1.6531 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.6791 | |
| 96 | P | H | -1.9814 | |
| 97 | E | H | -2.4142 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8082 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1720 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0504 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | L | H | 0.0000 | |
| 107 | R | H | -1.1453 | |
| 108 | S | H | -0.8969 | |
| 114 | S | H | -1.1966 | |
| 115 | K | H | -1.6187 | |
| 116 | L | H | -0.1390 | |
| 117 | F | H | 0.0563 | |
| 118 | W | H | 0.5433 | |
| 119 | G | H | 0.0087 | |
| 120 | Q | H | -0.7542 | |
| 121 | G | H | -0.3645 | |
| 122 | T | H | -0.5007 | |
| 123 | Q | H | -0.5119 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1544 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8579 | |
| 128 | S | H | -0.9041 |