| Chain sequence(s) |
A: GPLPLNPEPELRSTDEYVTPTDLLYVAETELITETGHPTADIVVDGKVVVPRVSAWDYKVFKLTLPDPNTLPLPSDDFLDKSTEIAIWRLLAFKIHVFGPLGKGSYGHPNFNRFGNVDNPTEYQHEGEDDDVNLSFYPKLKQEFVIGDLPPLGVYTAPAAPAPGLPPGAPLPLEQVSTVIEHGDVADIGFGARDYAALLPRKDEVPEIILDTTTKRLDYDGMRAEPYGRRMFTSGSYEKSYNIENYVLDGEDLFPLPTAPPPSPLYTPPPPSSPYATPPSYNYFTLPDYGEIKEEDLLFNKPVFIEKTPGLNQGILWYNRLYITVLDNRRAEIEEIETRVSTPEEDVYNPEDYVTSRRYSREYKLSLIIQLCKIPLTPEILKEIERLDPRILVNANLPFIPKKEFEDPYKGKKFIEIDLTDKLSSDLEKYPLGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2178 | |
| 2 | P | A | 0.4563 | |
| 3 | L | A | 1.3678 | |
| 4 | P | A | 0.4644 | |
| 5 | L | A | 0.9022 | |
| 6 | N | A | -1.0560 | |
| 7 | P | A | -1.6694 | |
| 8 | E | A | -2.6486 | |
| 9 | P | A | -2.2780 | |
| 10 | E | A | -2.4954 | |
| 11 | L | A | -1.3811 | |
| 12 | R | A | -2.1286 | |
| 13 | S | A | -1.7854 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.0405 | |
| 16 | E | A | -2.9706 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9235 | |
| 20 | P | A | -0.9292 | |
| 21 | T | A | -0.8905 | |
| 22 | D | A | -1.6181 | |
| 23 | L | A | -0.4897 | |
| 24 | L | A | -0.1780 | |
| 25 | Y | A | -0.1407 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.9144 | |
| 29 | T | A | 0.0000 | |
| 30 | E | A | -1.3991 | |
| 31 | L | A | 0.3182 | |
| 32 | I | A | 0.0698 | |
| 33 | T | A | -0.1745 | |
| 34 | E | A | -0.5017 | |
| 35 | T | A | -0.4980 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.0140 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.7265 | |
| 40 | A | A | -0.4070 | |
| 41 | D | A | -0.0763 | |
| 42 | I | A | 1.8682 | |
| 43 | V | A | 2.4999 | |
| 44 | V | A | 1.6090 | |
| 45 | D | A | -0.9733 | |
| 46 | G | A | -0.5378 | |
| 47 | K | A | -0.2166 | |
| 48 | V | A | 2.1126 | |
| 49 | V | A | 2.5276 | |
| 50 | V | A | 1.4372 | |
| 51 | P | A | 0.1908 | |
| 52 | R | A | -0.5980 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.5283 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.9853 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.9535 | |
| 70 | T | A | -0.3210 | |
| 71 | L | A | -0.0227 | |
| 72 | P | A | -0.2664 | |
| 73 | L | A | -0.4370 | |
| 74 | P | A | -0.6987 | |
| 75 | S | A | -1.5554 | |
| 76 | D | A | -2.8657 | |
| 77 | D | A | -3.0847 | |
| 78 | F | A | -1.7086 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -3.0938 | |
| 81 | K | A | -2.8479 | |
| 82 | S | A | -1.6619 | |
| 83 | T | A | -1.3124 | |
| 84 | E | A | -1.6292 | |
| 85 | I | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3511 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | -0.7879 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.4937 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.4700 | |
| 99 | G | A | -0.3667 | |
| 100 | P | A | -0.3343 | |
| 101 | L | A | -0.4222 | |
| 102 | G | A | -0.9065 | |
| 103 | K | A | -1.0763 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.2911 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8706 | |
| 108 | H | A | -1.4672 | |
| 109 | P | A | -1.4831 | |
| 110 | N | A | -2.3940 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -1.1309 | |
| 114 | F | A | -0.9329 | |
| 115 | G | A | 0.0000 | |
| 116 | N | A | -1.2807 | |
| 117 | V | A | -0.9058 | |
| 118 | D | A | -2.1091 | |
| 119 | N | A | -2.4614 | |
| 120 | P | A | -1.7052 | |
| 121 | T | A | -1.5425 | |
| 122 | E | A | -2.1193 | |
| 123 | Y | A | -0.7224 | |
| 124 | Q | A | -1.5052 | |
| 125 | H | A | -2.1754 | |
| 126 | E | A | -3.4634 | |
| 127 | G | A | -2.9773 | |
| 128 | E | A | -3.3537 | |
| 129 | D | A | -3.4562 | |
| 130 | D | A | -2.3213 | |
| 131 | D | A | -1.9526 | |
| 132 | V | A | -1.1021 | |
| 133 | N | A | -1.6183 | |
| 134 | L | A | -0.8543 | |
| 135 | S | A | -0.4337 | |
| 136 | F | A | 0.0000 | |
| 137 | Y | A | 0.5317 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0453 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.1986 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | Y | A | -1.2161 | |
| 156 | T | A | -0.9122 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | 0.2339 | |
| 159 | A | A | 0.2561 | |
| 160 | A | A | 0.1796 | |
| 161 | P | A | 0.3289 | |
| 162 | A | A | 0.1002 | |
| 163 | P | A | -0.2515 | |
| 164 | G | A | -0.2034 | |
| 165 | L | A | 0.5638 | |
| 166 | P | A | -0.1647 | |
| 167 | P | A | -0.4383 | |
| 168 | G | A | -0.0852 | |
| 169 | A | A | 0.2944 | |
| 170 | P | A | 0.9862 | |
| 171 | L | A | 1.5026 | |
| 172 | P | A | 0.9421 | |
| 173 | L | A | 0.8777 | |
| 174 | E | A | -0.9896 | |
| 175 | Q | A | -1.4622 | |
| 176 | V | A | -0.5812 | |
| 177 | S | A | -0.4366 | |
| 178 | T | A | 0.1106 | |
| 179 | V | A | -0.1893 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2177 | |
| 182 | H | A | -0.9562 | |
| 183 | G | A | -0.6739 | |
| 184 | D | A | -0.8239 | |
| 185 | V | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.7505 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.0770 | |
| 190 | F | A | -0.1462 | |
| 191 | G | A | -0.6310 | |
| 192 | A | A | -1.1757 | |
| 193 | R | A | -1.5578 | |
| 194 | D | A | -1.0337 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.3275 | |
| 197 | A | A | -0.4333 | |
| 198 | L | A | -0.1427 | |
| 199 | L | A | -1.1093 | |
| 200 | P | A | -1.3528 | |
| 201 | R | A | -1.8427 | |
| 202 | K | A | -2.7865 | |
| 203 | D | A | 0.0000 | |
| 204 | E | A | -1.3696 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | E | A | -1.6449 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.5913 | |
| 211 | D | A | -2.1308 | |
| 212 | T | A | -1.2007 | |
| 213 | T | A | -0.8925 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | R | A | -1.3629 | |
| 217 | L | A | 0.0000 | |
| 218 | D | A | -1.1303 | |
| 219 | Y | A | -1.4690 | |
| 220 | D | A | -2.4681 | |
| 221 | G | A | -1.6817 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -2.7214 | |
| 224 | A | A | -1.6388 | |
| 225 | E | A | -1.4291 | |
| 226 | P | A | -0.7644 | |
| 227 | Y | A | 0.0000 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4591 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.4503 | |
| 234 | S | A | -0.0717 | |
| 235 | G | A | -0.0003 | |
| 236 | S | A | -0.4271 | |
| 237 | Y | A | -0.7680 | |
| 238 | E | A | -1.9316 | |
| 239 | K | A | -1.1963 | |
| 240 | S | A | -0.4796 | |
| 241 | Y | A | 0.2577 | |
| 242 | N | A | -0.2040 | |
| 243 | I | A | 0.5939 | |
| 244 | E | A | -0.6644 | |
| 245 | N | A | -0.7853 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | L | A | -0.2663 | |
| 249 | D | A | -1.6301 | |
| 250 | G | A | -1.5796 | |
| 251 | E | A | -1.9292 | |
| 252 | D | A | -0.2655 | |
| 253 | L | A | 1.4565 | |
| 254 | F | A | 2.1703 | |
| 255 | P | A | 0.9036 | |
| 256 | L | A | 1.3653 | |
| 257 | P | A | 0.6085 | |
| 258 | T | A | 0.0885 | |
| 259 | A | A | -0.0501 | |
| 260 | P | A | -0.5485 | |
| 261 | P | A | -0.4138 | |
| 262 | P | A | -0.3057 | |
| 263 | S | A | 0.1690 | |
| 264 | P | A | 0.3850 | |
| 265 | L | A | 1.5574 | |
| 266 | Y | A | 0.9809 | |
| 267 | T | A | 0.1315 | |
| 268 | P | A | -0.0162 | |
| 269 | P | A | -0.1200 | |
| 270 | P | A | -0.3934 | |
| 271 | P | A | -0.4013 | |
| 272 | S | A | -0.3288 | |
| 273 | S | A | -0.0524 | |
| 274 | P | A | 0.0594 | |
| 275 | Y | A | 0.7075 | |
| 276 | A | A | 0.1638 | |
| 277 | T | A | -0.2803 | |
| 278 | P | A | -0.1820 | |
| 279 | P | A | -0.6172 | |
| 280 | S | A | -0.8740 | |
| 281 | Y | A | 0.3255 | |
| 282 | N | A | 0.0545 | |
| 283 | Y | A | 1.3212 | |
| 284 | F | A | 0.6641 | |
| 285 | T | A | 0.1822 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | Y | A | 0.0000 | |
| 290 | G | A | -0.8976 | |
| 291 | E | A | -2.0750 | |
| 292 | I | A | -1.9996 | |
| 293 | K | A | -3.2787 | |
| 294 | E | A | -3.3790 | |
| 295 | E | A | -3.3861 | |
| 296 | D | A | -2.3328 | |
| 297 | L | A | -1.5293 | |
| 298 | L | A | -0.5730 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2050 | |
| 301 | K | A | -1.8034 | |
| 302 | P | A | -0.8871 | |
| 303 | V | A | -0.0883 | |
| 304 | F | A | -0.4268 | |
| 305 | I | A | 0.0000 | |
| 306 | E | A | -2.4786 | |
| 307 | K | A | -2.7419 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -1.0177 | |
| 310 | G | A | -0.7862 | |
| 311 | L | A | -0.7338 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | Y | A | -0.5255 | |
| 319 | N | A | -0.7996 | |
| 320 | R | A | -0.9629 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | R | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.4378 | |
| 333 | I | A | -2.0678 | |
| 334 | E | A | -2.8825 | |
| 335 | E | A | -2.9070 | |
| 336 | I | A | -0.9499 | |
| 337 | E | A | -1.6191 | |
| 338 | T | A | -0.5874 | |
| 339 | R | A | -0.9882 | |
| 340 | V | A | 0.8409 | |
| 341 | S | A | -0.1604 | |
| 342 | T | A | -0.7502 | |
| 343 | P | A | -1.6948 | |
| 344 | E | A | -2.7298 | |
| 345 | E | A | -2.8285 | |
| 346 | D | A | -1.9562 | |
| 347 | V | A | 0.4207 | |
| 348 | Y | A | 0.6644 | |
| 349 | N | A | -0.9087 | |
| 350 | P | A | -1.0069 | |
| 351 | E | A | -1.5955 | |
| 352 | D | A | -0.8129 | |
| 353 | Y | A | -0.1299 | |
| 354 | V | A | 0.7478 | |
| 355 | T | A | -0.5407 | |
| 356 | S | A | -1.0994 | |
| 357 | R | A | -2.1084 | |
| 358 | R | A | -1.8505 | |
| 359 | Y | A | 0.0000 | |
| 360 | S | A | -0.8554 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.2342 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.4944 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | -0.3669 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.5792 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8412 | |
| 376 | L | A | -0.9187 | |
| 377 | T | A | -0.9473 | |
| 378 | P | A | -1.5164 | |
| 379 | E | A | -2.6077 | |
| 380 | I | A | 0.0000 | |
| 381 | L | A | -1.8681 | |
| 382 | K | A | -3.1427 | |
| 383 | E | A | 0.0000 | |
| 384 | I | A | 0.0000 | |
| 385 | E | A | -2.9823 | |
| 386 | R | A | -2.2711 | |
| 387 | L | A | -1.3537 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -1.5461 | |
| 390 | R | A | -1.6868 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.8233 | |
| 394 | N | A | -2.0373 | |
| 395 | A | A | -1.2368 | |
| 396 | N | A | -1.6972 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.0569 | |
| 399 | F | A | 1.2278 | |
| 400 | I | A | -0.0295 | |
| 401 | P | A | -1.3180 | |
| 402 | K | A | -3.0339 | |
| 403 | K | A | -3.5137 | |
| 404 | E | A | -3.2922 | |
| 405 | F | A | -1.9522 | |
| 406 | E | A | -2.7838 | |
| 407 | D | A | -2.5089 | |
| 408 | P | A | -1.6307 | |
| 409 | Y | A | -1.9694 | |
| 410 | K | A | -3.0660 | |
| 411 | G | A | -2.2473 | |
| 412 | K | A | -2.5429 | |
| 413 | K | A | -2.7393 | |
| 414 | F | A | -1.4064 | |
| 415 | I | A | -1.0765 | |
| 416 | E | A | -2.2015 | |
| 417 | I | A | -1.7630 | |
| 418 | D | A | -2.7121 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9054 | |
| 421 | D | A | -2.6906 | |
| 422 | K | A | -2.6138 | |
| 423 | L | A | -1.0320 | |
| 424 | S | A | -1.1082 | |
| 425 | S | A | -0.7548 | |
| 426 | D | A | -1.8293 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.0992 | |
| 429 | K | A | -2.9213 | |
| 430 | Y | A | -1.7526 | |
| 431 | P | A | -1.3752 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.6025 | |
| 435 | E | A | -1.8641 | |
| 436 | Y | A | -1.0023 | |
| 437 | L | A | -0.7817 | |
| 438 | N | A | -2.0547 | |
| 439 | R | A | -2.2784 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine