Project name: query_structure

Status: done

Started: 2026-03-17 01:11:28
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGALVEMLRSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:39)
Show buried residues

Minimal score value
-3.3903
Maximal score value
2.0326
Average score
-0.6558
Total score value
-61.644

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6185
2 S A 0.0571
3 D A -0.7596
4 V A -1.1655
5 P A 0.0000
6 R A -3.1513
7 D A -3.3903
8 L A 0.0000
9 E A -2.1051
10 V A 0.1132
11 V A 1.5504
12 A A 0.9049
13 A A 0.3207
14 T A -0.3403
15 P A -1.1207
16 T A -0.9995
17 S A -0.5306
18 L A 0.0000
19 L A 0.7602
20 I A 0.0000
21 S A -1.1335
22 W A 0.0000
23 D A -3.2179
24 A A -1.6871
25 P A 0.0000
26 A A 0.2972
27 V A 0.3405
28 T A -0.3584
29 V A -1.0107
30 R A -1.7552
31 Y A -1.0762
32 Y A 0.0000
33 R A -0.9818
34 I A 0.0000
35 T A -0.5849
36 Y A -0.3134
37 G A 0.0000
38 E A -1.5795
39 T A -1.2645
40 G A -1.2508
41 G A -1.4420
42 N A -1.5627
43 S A -0.8880
44 P A -0.3382
45 V A 0.4162
46 Q A -0.8956
47 E A -1.7033
48 F A -0.7366
49 T A -0.3566
50 V A 0.0000
51 P A -1.1882
52 G A -1.4099
53 S A -1.3782
54 K A -2.1967
55 S A -1.3887
56 T A -0.7637
57 A A 0.0000
58 T A 0.2411
59 I A 0.0000
60 S A -0.6597
61 G A -1.0288
62 L A 0.0000
63 K A -2.3736
64 P A -1.6626
65 G A -1.4527
66 V A -1.4200
67 D A -2.1109
68 Y A 0.0000
69 T A -0.7806
70 I A 0.0000
71 T A -0.2051
72 V A 0.0000
73 Y A -0.8696
74 A A 0.0000
75 V A 0.0000
76 T A -0.5089
77 G A 0.1720
78 A A 0.8992
79 L A 2.0326
80 V A 1.9196
81 E A -0.0673
82 M A 0.5352
83 L A 0.1116
84 R A -1.7798
85 S A 0.0000
86 K A -2.0646
87 P A -1.3186
88 I A -0.6358
89 S A -0.8484
90 I A -0.7349
91 N A -1.7341
92 Y A -1.4823
93 R A -2.5353
94 T A -1.6354
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Laboratory of Theory of Biopolymers 2018