Project name: 7.34B1

Status: done

Started: 2026-07-07 07:49:26
Settings
Chain sequence(s) H: EVMLVESGGGFVKPGGSLKLSCAASGFTFSSYSMSWVRQTPEKRLEWVATISGGGGITYYSDSVKGRFTISRDNAKNTLYLQMSSLRSEDTALYYCARLLLLYYAMDYWGQGTSVTVSS
L: DIQMSQSPSSLSASLGDTITITCHASQNINVWLSWYQQTPGNFPKLLIYKASNLHTGVPSRFSGSGSGTGFALTVSSLQPEDIATYYCQQGQSYPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-3.2225
Maximal score value
2.3292
Average score
-0.4694
Total score value
-106.0805

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.6253
2 V H -0.3044
3 M H 0.5148
4 L H 0.0000
5 V H 0.8732
6 E H 0.0000
7 S H -0.4968
8 G H -0.7739
9 G H -0.2607
11 G H 0.6111
12 F H 1.5198
13 V H -0.0279
14 K H -1.7851
15 P H -1.9950
16 G H -1.4913
17 G H -1.1921
18 S H -0.9616
19 L H -0.4780
20 K H -1.4199
21 L H 0.0000
22 S H -0.3331
23 C H 0.0000
24 A H -0.0220
25 A H 0.0000
26 S H -0.4213
27 G H -0.7313
28 F H -0.2661
29 T H -0.2648
30 F H 0.0000
35 S H -0.8360
36 S H -0.1706
37 Y H 0.3049
38 S H 0.0000
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 T H -2.0182
46 P H -1.9832
47 E H -3.0964
48 K H -3.0712
49 R H -3.2225
50 L H 0.0000
51 E H -1.0482
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 T H 0.0000
56 I H 0.0000
57 S H 0.4270
58 G H -0.1258
59 G H -0.5394
62 G H -0.2019
63 G H 0.2514
64 I H 1.7368
65 T H 1.0531
66 Y H 0.6154
67 Y H -0.5601
68 S H -1.3849
69 D H -2.5181
70 S H -1.6705
71 V H 0.0000
72 K H -2.2637
74 G H -1.5407
75 R H -1.4676
76 F H 0.0000
77 T H -0.7198
78 I H 0.0000
79 S H -0.2242
80 R H -0.9951
81 D H -1.4299
82 N H -1.6880
83 A H -1.3457
84 K H -2.3331
85 N H -1.8567
86 T H -1.0480
87 L H 0.0000
88 Y H -0.4158
89 L H 0.0000
90 Q H -1.2330
91 M H 0.0000
92 S H -0.9958
93 S H -1.1161
94 L H 0.0000
95 R H -2.3323
96 S H -1.9943
97 E H -2.3513
98 D H 0.0000
99 T H -0.6490
100 A H 0.0000
101 L H -0.1190
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 L H 0.0000
108 L H 1.5511
109 L H 2.1087
110 L H 2.3292
112 Y H 1.6999
113 Y H 1.2602
114 A H 0.0000
115 M H 0.0000
116 D H 0.0000
117 Y H 0.5973
118 W H 0.0000
119 G H 0.0000
120 Q H -0.7920
121 G H -0.3764
122 T H 0.0000
123 S H -0.1060
124 V H 0.0000
125 T H -0.0074
126 V H 0.0000
127 S H -0.7041
128 S H -0.6538
1 D L -2.3626
2 I L 0.0000
3 Q L -2.0023
4 M L 0.0000
5 S L -1.1419
6 Q L -0.9058
7 S L -0.6543
8 P L -0.7124
9 S L -0.9552
10 S L -1.2749
11 L L -0.9806
12 S L -1.2787
13 A L 0.0000
14 S L -0.6887
15 L L 0.2867
16 G L -0.3961
17 D L -0.7066
18 T L -0.4193
19 I L 0.0000
20 T L -0.1278
21 I L 0.0000
22 T L -0.5625
23 C L 0.0000
24 H L -1.7440
25 A L 0.0000
26 S L -1.7956
27 Q L -2.2770
28 N L -2.0129
29 I L 0.0000
36 N L -1.2133
37 V L 0.0740
38 W L 0.1567
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.4323
45 T L -0.7110
46 P L -0.4681
47 G L -0.8352
48 N L -0.7927
49 F L -0.0854
50 P L 0.0000
51 K L -0.3273
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1898
56 K L -0.0386
57 A L 0.0000
65 S L -0.3646
66 N L -0.4658
67 L L 0.0266
68 H L -0.1242
69 T L -0.2361
70 G L -0.4022
71 V L -0.1553
72 P L -0.3148
74 S L -0.3906
75 R L -0.5991
76 F L 0.0000
77 S L -0.3756
78 G L -0.3997
79 S L -0.5342
80 G L -0.7331
83 S L -0.8381
84 G L -1.2581
85 T L -1.4092
86 G L -1.2329
87 F L 0.0000
88 A L -0.4819
89 L L 0.0000
90 T L -0.2501
91 V L 0.0000
92 S L -0.5400
93 S L -0.5843
94 L L 0.0000
95 Q L -0.8816
96 P L -1.0467
97 E L -1.8213
98 D L 0.0000
99 I L -0.8458
100 A L 0.0000
101 T L -1.1279
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 G L 0.0000
108 Q L -0.4289
109 S L -0.3464
114 Y L -0.2182
115 P L -0.6367
116 W L 0.0000
117 T L -0.7269
118 F L 0.0000
119 G L 0.0000
120 G L -1.8283
121 G L 0.0000
122 T L 0.0000
123 K L -2.1127
124 L L 0.0000
125 E L -1.8463
126 I L -1.0830
127 K L -1.6681
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Laboratory of Theory of Biopolymers 2018