| Chain sequence(s) |
H: EVMLVESGGGFVKPGGSLKLSCAASGFTFSSYSMSWVRQTPEKRLEWVATISGGGGITYYSDSVKGRFTISRDNAKNTLYLQMSSLRSEDTALYYCARLLLLYYAMDYWGQGTSVTVSS
L: DIQMSQSPSSLSASLGDTITITCHASQNINVWLSWYQQTPGNFPKLLIYKASNLHTGVPSRFSGSGSGTGFALTVSSLQPEDIATYYCQQGQSYPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6253 | |
| 2 | V | H | -0.3044 | |
| 3 | M | H | 0.5148 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8732 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4968 | |
| 8 | G | H | -0.7739 | |
| 9 | G | H | -0.2607 | |
| 11 | G | H | 0.6111 | |
| 12 | F | H | 1.5198 | |
| 13 | V | H | -0.0279 | |
| 14 | K | H | -1.7851 | |
| 15 | P | H | -1.9950 | |
| 16 | G | H | -1.4913 | |
| 17 | G | H | -1.1921 | |
| 18 | S | H | -0.9616 | |
| 19 | L | H | -0.4780 | |
| 20 | K | H | -1.4199 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3331 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0220 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.4213 | |
| 27 | G | H | -0.7313 | |
| 28 | F | H | -0.2661 | |
| 29 | T | H | -0.2648 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.8360 | |
| 36 | S | H | -0.1706 | |
| 37 | Y | H | 0.3049 | |
| 38 | S | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -2.0182 | |
| 46 | P | H | -1.9832 | |
| 47 | E | H | -3.0964 | |
| 48 | K | H | -3.0712 | |
| 49 | R | H | -3.2225 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0482 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.4270 | |
| 58 | G | H | -0.1258 | |
| 59 | G | H | -0.5394 | |
| 62 | G | H | -0.2019 | |
| 63 | G | H | 0.2514 | |
| 64 | I | H | 1.7368 | |
| 65 | T | H | 1.0531 | |
| 66 | Y | H | 0.6154 | |
| 67 | Y | H | -0.5601 | |
| 68 | S | H | -1.3849 | |
| 69 | D | H | -2.5181 | |
| 70 | S | H | -1.6705 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.2637 | |
| 74 | G | H | -1.5407 | |
| 75 | R | H | -1.4676 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7198 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2242 | |
| 80 | R | H | -0.9951 | |
| 81 | D | H | -1.4299 | |
| 82 | N | H | -1.6880 | |
| 83 | A | H | -1.3457 | |
| 84 | K | H | -2.3331 | |
| 85 | N | H | -1.8567 | |
| 86 | T | H | -1.0480 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4158 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.2330 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.9958 | |
| 93 | S | H | -1.1161 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3323 | |
| 96 | S | H | -1.9943 | |
| 97 | E | H | -2.3513 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6490 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | -0.1190 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | L | H | 0.0000 | |
| 108 | L | H | 1.5511 | |
| 109 | L | H | 2.1087 | |
| 110 | L | H | 2.3292 | |
| 112 | Y | H | 1.6999 | |
| 113 | Y | H | 1.2602 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.5973 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.7920 | |
| 121 | G | H | -0.3764 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.1060 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0074 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7041 | |
| 128 | S | H | -0.6538 | |
| 1 | D | L | -2.3626 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.0023 | |
| 4 | M | L | 0.0000 | |
| 5 | S | L | -1.1419 | |
| 6 | Q | L | -0.9058 | |
| 7 | S | L | -0.6543 | |
| 8 | P | L | -0.7124 | |
| 9 | S | L | -0.9552 | |
| 10 | S | L | -1.2749 | |
| 11 | L | L | -0.9806 | |
| 12 | S | L | -1.2787 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.6887 | |
| 15 | L | L | 0.2867 | |
| 16 | G | L | -0.3961 | |
| 17 | D | L | -0.7066 | |
| 18 | T | L | -0.4193 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.1278 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5625 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -1.7440 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.7956 | |
| 27 | Q | L | -2.2770 | |
| 28 | N | L | -2.0129 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.2133 | |
| 37 | V | L | 0.0740 | |
| 38 | W | L | 0.1567 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.4323 | |
| 45 | T | L | -0.7110 | |
| 46 | P | L | -0.4681 | |
| 47 | G | L | -0.8352 | |
| 48 | N | L | -0.7927 | |
| 49 | F | L | -0.0854 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.3273 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1898 | |
| 56 | K | L | -0.0386 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.3646 | |
| 66 | N | L | -0.4658 | |
| 67 | L | L | 0.0266 | |
| 68 | H | L | -0.1242 | |
| 69 | T | L | -0.2361 | |
| 70 | G | L | -0.4022 | |
| 71 | V | L | -0.1553 | |
| 72 | P | L | -0.3148 | |
| 74 | S | L | -0.3906 | |
| 75 | R | L | -0.5991 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3756 | |
| 78 | G | L | -0.3997 | |
| 79 | S | L | -0.5342 | |
| 80 | G | L | -0.7331 | |
| 83 | S | L | -0.8381 | |
| 84 | G | L | -1.2581 | |
| 85 | T | L | -1.4092 | |
| 86 | G | L | -1.2329 | |
| 87 | F | L | 0.0000 | |
| 88 | A | L | -0.4819 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2501 | |
| 91 | V | L | 0.0000 | |
| 92 | S | L | -0.5400 | |
| 93 | S | L | -0.5843 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.8816 | |
| 96 | P | L | -1.0467 | |
| 97 | E | L | -1.8213 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.8458 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.1279 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | Q | L | -0.4289 | |
| 109 | S | L | -0.3464 | |
| 114 | Y | L | -0.2182 | |
| 115 | P | L | -0.6367 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.7269 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.8283 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.1127 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.8463 | |
| 126 | I | L | -1.0830 | |
| 127 | K | L | -1.6681 |