| Chain sequence(s) |
A: MGPPRRVCRAGLLFVLLVALAAGDAGPRGEPPGEEGGRDGIGGARCETQNTGQMSAPGALVPFYVGMASMGVCIIAHVCQICQRLLAAGHA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7443 | |
| 2 | G | A | -0.4878 | |
| 3 | P | A | -0.9631 | |
| 4 | P | A | -1.3977 | |
| 5 | R | A | -2.6848 | |
| 6 | R | A | -2.3699 | |
| 7 | V | A | 0.1323 | |
| 8 | C | A | 0.0290 | |
| 9 | R | A | -0.8601 | |
| 10 | A | A | 0.9353 | |
| 11 | G | A | 2.5181 | |
| 12 | L | A | 3.3561 | |
| 13 | L | A | 3.9586 | |
| 14 | F | A | 4.6516 | |
| 15 | V | A | 4.7072 | |
| 16 | L | A | 4.9936 | |
| 17 | L | A | 4.6921 | |
| 18 | V | A | 3.4847 | |
| 19 | A | A | 2.6313 | |
| 20 | L | A | 2.5141 | |
| 21 | A | A | 1.0589 | |
| 22 | A | A | 0.6786 | |
| 23 | G | A | -0.5860 | |
| 24 | D | A | -1.8248 | |
| 25 | A | A | -1.0723 | |
| 26 | G | A | -1.7353 | |
| 27 | P | A | -2.1470 | |
| 28 | R | A | -2.9645 | |
| 29 | G | A | -2.4977 | |
| 30 | E | A | -2.8268 | |
| 31 | P | A | -2.1372 | |
| 32 | P | A | -1.7466 | |
| 33 | G | A | -2.1939 | |
| 34 | E | A | -3.2672 | |
| 35 | E | A | -3.3271 | |
| 36 | G | A | -2.7116 | |
| 37 | G | A | -2.6168 | |
| 38 | R | A | -2.9864 | |
| 39 | D | A | -2.7171 | |
| 40 | G | A | -0.9867 | |
| 41 | I | A | 0.8372 | |
| 42 | G | A | -0.0141 | |
| 43 | G | A | -0.7300 | |
| 44 | A | A | -1.0704 | |
| 45 | R | A | -2.1419 | |
| 46 | C | A | -1.2327 | |
| 47 | E | A | -2.5296 | |
| 48 | T | A | -2.0942 | |
| 49 | Q | A | -2.2614 | |
| 50 | N | A | -2.5118 | |
| 51 | T | A | -1.4927 | |
| 52 | G | A | -1.4344 | |
| 53 | Q | A | -1.2940 | |
| 54 | M | A | -0.0585 | |
| 55 | S | A | -0.1351 | |
| 56 | A | A | 0.3574 | |
| 57 | P | A | 0.8037 | |
| 58 | G | A | 0.5893 | |
| 59 | A | A | 1.5610 | |
| 60 | L | A | 3.1040 | |
| 61 | V | A | 3.4545 | |
| 62 | P | A | 2.5679 | |
| 63 | F | A | 3.7627 | |
| 64 | Y | A | 3.7387 | |
| 65 | V | A | 2.9246 | |
| 66 | G | A | 2.1257 | |
| 67 | M | A | 2.1728 | |
| 68 | A | A | 1.7758 | |
| 69 | S | A | 2.1335 | |
| 70 | M | A | 2.4178 | |
| 71 | G | A | 1.9680 | |
| 72 | V | A | 2.7212 | |
| 73 | C | A | 2.8725 | |
| 74 | I | A | 3.5330 | |
| 75 | I | A | 3.6977 | |
| 76 | A | A | 2.5450 | |
| 77 | H | A | 1.5102 | |
| 78 | V | A | 2.6807 | |
| 79 | C | A | 1.8570 | |
| 80 | Q | A | 0.7957 | |
| 81 | I | A | 2.0270 | |
| 82 | C | A | 1.4750 | |
| 83 | Q | A | -0.0223 | |
| 84 | R | A | -0.3762 | |
| 85 | L | A | 1.4757 | |
| 86 | L | A | 1.3339 | |
| 87 | A | A | 0.2472 | |
| 88 | A | A | 0.0174 | |
| 89 | G | A | -0.2591 | |
| 90 | H | A | -0.6946 | |
| 91 | A | A | -0.3352 |