Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTNYWMNWVRQAPRQGLEWMGMFHPTGDVTRLNQKFKDRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARTTSMIIGGFAYWGQGTLVTVSS
L: DIVMTQTPLSLSVTPGQPASISCRSSKSLLHRNAITYFYWYLHKPGQPPQLLIYQMSNLASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCAQNLELPLTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:47) [INFO] Main: Simulation completed successfully. (00:02:50) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.3440 | |
2 | V | H | -0.5381 | |
3 | Q | H | -0.7788 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.6378 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.4262 | |
8 | G | H | -0.4025 | |
9 | A | H | 0.3087 | |
11 | E | H | 0.0692 | |
12 | V | H | 0.9887 | |
13 | K | H | -1.0083 | |
14 | K | H | -2.1981 | |
15 | P | H | -2.0962 | |
16 | G | H | -1.6191 | |
17 | A | H | -1.2918 | |
18 | S | H | -1.3811 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.9521 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.5284 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.6945 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.6506 | |
27 | G | H | -0.8754 | |
28 | Y | H | -0.4547 | |
29 | T | H | -0.3432 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.6277 | |
36 | N | H | -0.8813 | |
37 | Y | H | -0.1146 | |
38 | W | H | 0.2684 | |
39 | M | H | 0.0000 | |
40 | N | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.6818 | |
45 | A | H | -1.2660 | |
46 | P | H | -1.7112 | |
47 | R | H | -2.6424 | |
48 | Q | H | -2.3999 | |
49 | G | H | -1.3671 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.6257 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | M | H | 0.0884 | |
56 | F | H | 0.0000 | |
57 | H | H | -0.2940 | |
58 | P | H | 0.0000 | |
59 | T | H | -0.5914 | |
62 | G | H | -0.6783 | |
63 | D | H | -1.0560 | |
64 | V | H | 0.7924 | |
65 | T | H | 0.0788 | |
66 | R | H | -0.5268 | |
67 | L | H | -1.0706 | |
68 | N | H | -1.6036 | |
69 | Q | H | -2.7339 | |
70 | K | H | -2.9533 | |
71 | F | H | 0.0000 | |
72 | K | H | -3.1670 | |
74 | D | H | -3.0533 | |
75 | R | H | -2.1213 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.9593 | |
78 | M | H | 0.0000 | |
79 | T | H | -0.4692 | |
80 | R | H | -1.1736 | |
81 | D | H | -1.0350 | |
82 | T | H | -0.5805 | |
83 | S | H | -0.4716 | |
84 | T | H | -0.5713 | |
85 | S | H | -0.6521 | |
86 | T | H | 0.0000 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.6043 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.2249 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.3207 | |
93 | S | H | -1.4363 | |
94 | L | H | 0.0000 | |
95 | R | H | -3.1498 | |
96 | S | H | -2.3801 | |
97 | E | H | -2.5960 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.7170 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.7130 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | T | H | 0.0000 | |
108 | T | H | 0.8663 | |
109 | S | H | 0.7773 | |
110 | M | H | 1.9082 | |
111 | I | H | 2.6106 | |
112 | I | H | 1.5289 | |
113 | G | H | 0.8302 | |
114 | G | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | A | H | 0.3288 | |
117 | Y | H | 0.4443 | |
118 | W | H | 0.0690 | |
119 | G | H | 0.0000 | |
120 | Q | H | -0.9532 | |
121 | G | H | -0.2488 | |
122 | T | H | 0.0000 | |
123 | L | H | 1.0814 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0818 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9452 | |
128 | S | H | -0.7959 | |
1 | D | L | -1.5527 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.5856 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.3628 | |
6 | Q | L | 0.0000 | |
7 | T | L | -0.0083 | |
8 | P | L | 0.4383 | |
9 | L | L | 1.1563 | |
10 | S | L | 0.1517 | |
11 | L | L | -0.1298 | |
12 | S | L | -0.7741 | |
13 | V | L | 0.0000 | |
14 | T | L | -1.3534 | |
15 | P | L | -1.4534 | |
16 | G | L | -1.7318 | |
17 | Q | L | -1.8852 | |
18 | P | L | -1.7342 | |
19 | A | L | 0.0000 | |
20 | S | L | -0.8275 | |
21 | I | L | 0.0000 | |
22 | S | L | -0.7851 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.2709 | |
25 | S | L | 0.0000 | |
26 | S | L | -1.2204 | |
27 | K | L | -2.1112 | |
28 | S | L | -1.0275 | |
29 | L | L | 0.0000 | |
30 | L | L | 0.5210 | |
31 | H | L | -0.5722 | |
32 | R | L | -2.0131 | |
34 | N | L | -1.4568 | |
35 | A | L | -0.2934 | |
36 | I | L | 0.6325 | |
37 | T | L | 0.0000 | |
38 | Y | L | 0.5999 | |
39 | F | L | 0.0000 | |
40 | Y | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | L | L | 0.0000 | |
44 | H | L | -0.6253 | |
45 | K | L | -1.0180 | |
46 | P | L | -0.7395 | |
47 | G | L | -1.2952 | |
48 | Q | L | -1.7439 | |
49 | P | L | -1.1735 | |
50 | P | L | 0.0000 | |
51 | Q | L | -0.8020 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.2310 | |
56 | Q | L | 0.0000 | |
57 | M | L | 0.1924 | |
65 | S | L | -0.2831 | |
66 | N | L | -0.4002 | |
67 | L | L | -0.0213 | |
68 | A | L | -0.0094 | |
69 | S | L | -0.2997 | |
70 | G | L | -0.5875 | |
71 | V | L | -0.4354 | |
72 | P | L | -0.9145 | |
74 | D | L | -1.9383 | |
75 | R | L | 0.0000 | |
76 | F | L | 0.0000 | |
77 | S | L | -1.1550 | |
78 | G | L | -0.6605 | |
79 | S | L | -0.8127 | |
80 | G | L | -0.8532 | |
83 | S | L | -0.4647 | |
84 | G | L | -0.7137 | |
85 | T | L | -1.5146 | |
86 | D | L | -1.9109 | |
87 | F | L | 0.0000 | |
88 | T | L | -1.0372 | |
89 | L | L | 0.0000 | |
90 | K | L | -1.8768 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.9474 | |
93 | R | L | -2.5177 | |
94 | V | L | 0.0000 | |
95 | E | L | -1.5420 | |
96 | A | L | -1.2024 | |
97 | E | L | -1.6761 | |
98 | D | L | 0.0000 | |
99 | V | L | -0.0637 | |
100 | G | L | 0.0000 | |
101 | V | L | 0.1761 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | A | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | N | L | -0.2828 | |
108 | L | L | -0.2748 | |
109 | E | L | -1.2658 | |
114 | L | L | -0.0176 | |
115 | P | L | -0.6403 | |
116 | L | L | 0.0000 | |
117 | T | L | -0.1275 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.5497 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.4606 | |
124 | V | L | 0.0000 | |
125 | E | L | -0.7092 | |
126 | I | L | -0.6681 | |
127 | K | L | -1.6241 |